Gene Nham_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2730 
SymbolthyA 
ID4030163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3008355 
End bp3009149 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content60% 
IMG OID637971183 
Productthymidylate synthase 
Protein accessionYP_577969 
Protein GI92118240 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGT ACCACGATCT GCTCGAACGT ATTCTCAGCG ACGGCGCGGA GAAGCATGAC 
CGTACCGGCA CCGGAACATT GTCCATCTTC GGGCATCAGA TGCGTTTCAA TCTCGCATCG
GGATTTCCGA TGCTGACCAC CAAGAAGCTT CCGCTCAAGT CGATCGTGCA TGAACTGCTC
TGGTTCCTGA AGGGCGAGAC CAACGTCAGG TATCTGAGGG AGCACGGCGT CTCGATCTGG
GACGAGTGGG CCGACGCCAA CGGCGATCTC GGCCCGGTCT ACGGTTCGCA GTGGCGCTCA
TGGCCCGCGC CGGACGGACG CAGCATCGAC CAGATCGCCA ACGTAGTCGA CATGATCGGG
CGCAGTCCGG ATTCGCGGCG GCTGATCGTC AGCGCGTGGA ATCCGGCCGA TGTCGACAAG
ATGGCGCTGC CGCCGTGCCA CTGCCTGTTT CAGTTCTATG TTGCCGACGG AAAACTGTCG
TGCCAGCTTT ATCAGCGCTC GGCGGATGTG TTTCTGGGGG TGCCCTTCAA CATCGCGTCC
TATGCGTTGC TGACGATGAT GGTCGCGCAG GTCACGGGGC TCAAGCCCGG GGACTTCGTG
CACAGCCTCG GCGACGCGCA CCTCTATTTG AATCACCTCG ATCAGGCACG GCTTCAACTC
ACGCGGCCGA CACGATCGCT GCCGACGATG ACGATCAATC CCGAGGTGAA GAGTATCTTC
GCGTTCCGCT ACGAGGATTT CAAACTCGAG AACTACGATC CCCATCCGCA TATCAAGGCA
GAGGTCGCGG TGTGA
 
Protein sequence
MNQYHDLLER ILSDGAEKHD RTGTGTLSIF GHQMRFNLAS GFPMLTTKKL PLKSIVHELL 
WFLKGETNVR YLREHGVSIW DEWADANGDL GPVYGSQWRS WPAPDGRSID QIANVVDMIG
RSPDSRRLIV SAWNPADVDK MALPPCHCLF QFYVADGKLS CQLYQRSADV FLGVPFNIAS
YALLTMMVAQ VTGLKPGDFV HSLGDAHLYL NHLDQARLQL TRPTRSLPTM TINPEVKSIF
AFRYEDFKLE NYDPHPHIKA EVAV