| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2728 |
|---|
| Symbol | |
|---|
| ID | 4030161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3006505 |
|---|
| End bp | 3007662 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637971181 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_577967 |
|---|
| Protein GI | 92118238 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTGGA AAAATCAAAG CGGAGGCCCG TGGGGCTCCG GTCCGAAAGG ACCATGGGGA
TCCGGCCCGC AGCCGGCGGG GGGGCCGAAG CCGCCGGATC TCGAGGATCT GCTGCGCCGC
GCTCAGGAGC GTCTTCGGCA ACTGTTGCCG GGCGGACATC TGAGCACCAT GGGCATCGTG
CTGATCCTGA TCGGCGCGAT TGTGATCTGG GGCATGTCCG GTTTCTTCCG GGTGCAACCC
GATGAACTCG GCGCGGTGCT GCGCTTCGGC AAGCATGTGC GGACCGTGCA GCCCGGCCTC
AACTATCATC TGCCGTATCC GATCGAGACC GTGTTGCTGC CGAAGGCGCT GCGCGTCTCC
ACCCTCAATA TCGGTATGAC CCTGGTGCAG GACCCGGCGC GGCACACCAG CACGATGCGC
GACGTGCCGG AGGAAAGCCT GATGCTGACC GGCGACGAAA ACATCGTCGA CGTCGATTTC
ACCGTGTTGT GGCGGATCAA GCCGGATGGG GTCGGTGACT TCCTGTTCAA CATCCAGAAT
CCGGAAGGCA CCGTCAAAGC CGTGGCCGAA AGCGCGATGC GCGAGTGGGT CGGACGCTCG
GATATTCAAC CGATTCTGAC GTCCGAGCGA ACCAAAATTG AAGTCTCGGT GCAGGATCTG
ATGCAGAAGA CGCTGGACCA GTATGGCGCT GGCGTTCTGA TTCAGCAGGT GCAAATGCAG
AAGGTCGACC CACCGTCTCA GGTTATCGAT TCATTCCGCG ACGTGCAGGC GGCGCGCGCC
GACCTCGAGC GGCTGCAGAA CGAAGCCCAG ACCTATGCCA ACCGCGTCAT TCCCGATGCG
CGCGGACGGG CGTCGCAGAT TGTGCAGAAC GCCGAAGGCT ACAAGGAACA GGCCATCGCC
GAAGCCAAGG GTCAGAGTTC GCGATTCCTG CAGGTTTATG AGGCCTACAA GGCGGCGCCC
GACGTGACGC GCGAGCGCAT CTACCTGGAG ACCATGGAGC AGGTGCTCGG GGACGCCGAC
AAGCTGGTGT ACGATCCGGG TTCATCGTCT TCGGCGGGTA TCGTGCCTTA CCTGCCGCTG
AGCGAATTGA CTTCGCAGCG CGGCGCTGCG CACCAGACCG CGAACCCGCC AGCCAAGACG
AACGGGAGTG CCCGATGA
|
|---|
| Protein sequence | MPWKNQSGGP WGSGPKGPWG SGPQPAGGPK PPDLEDLLRR AQERLRQLLP GGHLSTMGIV
LILIGAIVIW GMSGFFRVQP DELGAVLRFG KHVRTVQPGL NYHLPYPIET VLLPKALRVS
TLNIGMTLVQ DPARHTSTMR DVPEESLMLT GDENIVDVDF TVLWRIKPDG VGDFLFNIQN
PEGTVKAVAE SAMREWVGRS DIQPILTSER TKIEVSVQDL MQKTLDQYGA GVLIQQVQMQ
KVDPPSQVID SFRDVQAARA DLERLQNEAQ TYANRVIPDA RGRASQIVQN AEGYKEQAIA
EAKGQSSRFL QVYEAYKAAP DVTRERIYLE TMEQVLGDAD KLVYDPGSSS SAGIVPYLPL
SELTSQRGAA HQTANPPAKT NGSAR
|
|---|
| |