| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2727 |
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| Symbol | |
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| ID | 4030160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3005609 |
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| End bp | 3006508 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971180 |
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| Product | HflC protein |
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| Protein accession | YP_577966 |
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| Protein GI | 92118237 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.772067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCG GAGTTATAGG GATTGCCGCG CTGCTGCTTA CGGCGGCCTT GATGGTGGTG
GGATACAGTT CCGTTTTCAC GGTGAGCCAG ACTGAGCAGG TATTGCTGGT GCGACTCGGC
GAACCGGTGC GCGTCGTCAC CGAGCCGGGA TTGCATTTCA AGGCGCCGTT CGTCGATTCC
GTGATCGACA TCGACAAACG AATCCTGGAC CTCGAGCAGG CGTCGCAGGA AGTCATTGCG
TCGGATCAGA AGCGGCTCGT CGTCGATGCG TTCGCGCGCT ATCGCATCAA GGATGCGCTG
CGGTTCTACC AAAGCGTCGG TACCGTCCAG GTCGCCAATA TCCAGTTGAC GACGCTGCTC
AACGCATCGC TGCGCCGGGT TCTGGGCGAG GTGACGTTCA TCCAGGTGGT GCGGGACGAG
CGCGAAACGC TGATGGCCCG CATCCGCGAC CAGCTCGACA AGGAGGCCAG CGGATACGGC
ATCTCGGTGG TCGATGTCCG GATTCGGCGA GCCGATCTGC CGGAGCAGAA CAGCCAGGCA
ATCTATCAGC GCATGCAGAC CGAGCGGCAA CGCGAAGCCG CCGAGTTCCG CGCTCAGGGC
GGTCAAAAGG CGCAGGAGAT CCGGGCCAAG GCCGACAAGG AAGCGACCGT GATCGTCGCC
GAGGCCAATT CCTCGTCCGA GCAGATCCGC GGTCAGGGCG ATGGCGAGCG CAACCGGCTG
TTTGCCGCGG CCTACAATCA GGCCCCGGCA TTCTTTGCGT TCTACCGCTC GATGACCGCT
TATCAGAAGG GCTTGAAGGG CAGCGACACC CGCTTCCTGC TGAAGCCGGA TTCCGATTTC
TTCCGCTTCT TCGGACATCC CGGCGGCAGG CCCGCTGCAG GCGACGCGCC GAAGCCGTAA
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| Protein sequence | MKVGVIGIAA LLLTAALMVV GYSSVFTVSQ TEQVLLVRLG EPVRVVTEPG LHFKAPFVDS
VIDIDKRILD LEQASQEVIA SDQKRLVVDA FARYRIKDAL RFYQSVGTVQ VANIQLTTLL
NASLRRVLGE VTFIQVVRDE RETLMARIRD QLDKEASGYG ISVVDVRIRR ADLPEQNSQA
IYQRMQTERQ REAAEFRAQG GQKAQEIRAK ADKEATVIVA EANSSSEQIR GQGDGERNRL
FAAAYNQAPA FFAFYRSMTA YQKGLKGSDT RFLLKPDSDF FRFFGHPGGR PAAGDAPKP
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