| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2679 |
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| Symbol | ispH |
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| ID | 4032453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2945883 |
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| End bp | 2946827 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637971131 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_577918 |
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| Protein GI | 92118189 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00132891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGACG CTCGTCCGAT TGAAGTTCTC CTAGCGCAGC CGCGTGGATT CTGCGCGGGC
GTCGTCCGCG CGATCGAGAT CGTCGAGTGC GCGCTGGAGA AGTATGGCCC CCCGGTGTAC
GTCCGCCACG AGATCGTTCA CAACAAGTAC GTCGTCGAAA GCCTGAAGAA CAAGGGCGCG
ATCTTCGTCG AGGATCTGTC CGAGGTTCCG CCTAAGGCCG TCACCGTGTT CAGCGCCCAC
GGCGTTGCGC GGAGCGTGGA AGAAGAGGCT GCCGCACGCG GTTTGCCCGT GCTCAACGCC
ACCTGCCCGT TGGTGACAAA GGTTCACAAT CAGGGCAAAC GCTACAAGTC CAAGGGACGG
ACCCTGATCC TGATCGGCCA CGCCGGCCAT CCCGAGGTTG AAGGAACCAT GGGACAGGTT
CCGGGCCCTG TCCTGCTGGT CCAGGATGTC GACGACGTCG CGGCCCTGAC GCTGCACGCC
GACACCCCGG TCGCCTATAT CACCCAGACG ACACTCAGCG TCGACGACAC CAAGGACATC
ATTCTCGCGC TCCAGCAGCG TTTCACCGAT ATCCAGGGCC CTGACACACG GGATATCTGC
TATGCAACAC AAAATCGGCA ATCTGCGGTA AGAGACCTCA GCAAGCTGGT GGATGTCATC
CTCGTAGTCG GAGCAGCCAA TAGTTCAAAC TCGAACCGGC TGCGCGAAAT TGGGACTGAA
GTCGGCGTTG CAAGTTATCT CATCGCCGAC GGCAGCGAAC TCAATGCTGA ATGGCTTAGA
GATGCGAAAA CCGTGGGCAT CACGGCCGGC GCATCGGCGC CGGAGGTGCT TGTCGATGAT
GTCATCGAGG CCTTGAGACG CATCGGTCCG GTTGCTGTTT CGGTGCTGCC GGGACGGGAA
GAAAACATCG AATTCCGCCT TCCGTCTGAA CTGACCCCAG CCTGA
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| Protein sequence | MTDARPIEVL LAQPRGFCAG VVRAIEIVEC ALEKYGPPVY VRHEIVHNKY VVESLKNKGA
IFVEDLSEVP PKAVTVFSAH GVARSVEEEA AARGLPVLNA TCPLVTKVHN QGKRYKSKGR
TLILIGHAGH PEVEGTMGQV PGPVLLVQDV DDVAALTLHA DTPVAYITQT TLSVDDTKDI
ILALQQRFTD IQGPDTRDIC YATQNRQSAV RDLSKLVDVI LVVGAANSSN SNRLREIGTE
VGVASYLIAD GSELNAEWLR DAKTVGITAG ASAPEVLVDD VIEALRRIGP VAVSVLPGRE
ENIEFRLPSE LTPA
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