| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2636 |
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| Symbol | |
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| ID | 4032836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2896037 |
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| End bp | 2897926 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637971090 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_577877 |
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| Protein GI | 92118148 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.668897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCTG CCCCCGACGA CGCCGTTGCC GATCCGCCGC TGGCCGCCGA TTTCGCACCG
GCTACCGCCG CCGACTGGCG CAAGCTGGTC GATGGCGTCC TGAAAGGCGC GCCCTTTGAG
AAGCTGGTCG CCAGGACCTA TGACGGTCTC AGGATCGAAC CGATCTATCC GCGCGCACAG
AACGCGCACG CGATCGGCGG TCGCGCTGCA GCAGTGCCAT GGCGGATCAT GCAGCGGATC
GATCATCCCG ACGCCGCTCA GGCCAACGCG CAGGCGCTGC ACGACCTCGA CAACGGCGCT
GGCGGCCTGA CGCTGGTGTT CGCTGGCGCC AATGGCGCGC ACGGGTTCGG GCTGCCGCCG
ACCCCGGAGG CTATCGCGAA AATTCTCGAT GGCGTTTTTC TCGACGCAGG CATCTCCATC
GCGTTGCAGA TCGGCCCGCA GTCGCGGATG GCCGCGATCC ATCTCGCCGA TTACGTCAAG
GGCAAGGACA TCGATCCCGC CGCCTGCGAT ATCCGCTTCG GTCTCGATCC GCTCGGCGCC
TGCGCGGTGT CGGGATCGAG TCCGTATACG TGGCCCGAAA TCATCCCAGT GGTGGCCGGT
GCTGCGAACA GTCTCGCCGC CGCGGGCTTC AAGGGTCCCT TCATTGTCGC CGACGGCCGG
GTGATCCACG ACGCCGGCGG ATCGGAGGCG CAGGAACTCG CCTTCGTGCT GGCATCGGCG
GTCGCATATC TCCGTGGCCT CGAAAGCGCC GGGACCGCGC TCGAGAATGC GCGCGGCCTG
ATCTACGCGC GGCTCAGCGC CGACGCCGAC CAGTTTCTGA CGCTGGCCAA ATTCCGCGCG
TTGCGGCTGT TGTGGGCGCG GATCGAGCAG GCTTGCGGCC TCGCGCCAAA GCCGTTGTTC
ATCGCCGCCG AGACCGCGTG GCGGATGCTG ACCCGGCGCG ACCCTTACGT GAATATGCTG
CGCGCCACCA TCGCCACGTT TTCGGCAGGG CTCGGCGGCG CCGACAGCCT CACCGTGCTG
CCGCATACGC TGGCGCTGGG CCTGCCCGAC GACTTCGCGC GCCGCATCGC CCGCAACACG
CAGTTCATTC TGCTGGAGGA ATCCAGCCTC GCCAAAGTGG CCGATCCGGC GGCAGGTTCA
GGCGGCATCG AGACGCTGAC GCGGCAGCTT TGCGAAGCAG CCTGGGCGTT GTTTCAGGAG
ATAGAGAAAG CAGGTGGGGC GTTCGCGGCG CTGACGCAAA GCCTCATTCA GCGCAATGTT
GTCGCGACTC GCGCGGCGCG CGAGGCCAAT GTCGCAAAAC GGCGCGACGT GCTCACCGGC
GCCAGCGAAT TTCCCAACCT GCATGAGAAG CCTCCAGAAG TGCTGGATGC GAAGCCGGTC
ATACTCGCGC CCTACGGCGA GACAAAAATC AAATTCGATG CGCTGGCGCC GATGCGGCTC
GCCGCACCCT ATGAAAAGCT ACGCGACCGC TCCGATGCGA TGCTTGCAGC GATCGGCGCG
CGGCCGAAAG TCTTTCTCGC CACTCTCGGC ACCGCCGCCG ACTTTACCGC GCGCGCCACC
TTCGCCCGGA GCTTCTTCGA GACCGGCGGC ATCGAGGCGG TCGATCCTCC CTCACCTCTC
GACGTAAAGA CAGCCGCCCT CGCCGCCGCC TTCAGGGCGT CCGGCGCACA ATTGGTCTGC
CTGTGCTCTT CGGACCATGT CTATGCCGAT CAGGCGGCCG CCGCGGTGCA GGCCTTTCAT
GCCGCGGGCG CACGCCATAT CTATCTGGCA GGGCCGCCGG GAAAGCTGGA AACTGCGCTG
CGCTCGGCCG GCGTGCAGGA TTTCATCTTC GCGGGCGGCG ATGCATTGGC GGTGTTGAGC
GACGCCTGGC GGCGACTGGA GCAACGATGA
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| Protein sequence | MPAAPDDAVA DPPLAADFAP ATAADWRKLV DGVLKGAPFE KLVARTYDGL RIEPIYPRAQ
NAHAIGGRAA AVPWRIMQRI DHPDAAQANA QALHDLDNGA GGLTLVFAGA NGAHGFGLPP
TPEAIAKILD GVFLDAGISI ALQIGPQSRM AAIHLADYVK GKDIDPAACD IRFGLDPLGA
CAVSGSSPYT WPEIIPVVAG AANSLAAAGF KGPFIVADGR VIHDAGGSEA QELAFVLASA
VAYLRGLESA GTALENARGL IYARLSADAD QFLTLAKFRA LRLLWARIEQ ACGLAPKPLF
IAAETAWRML TRRDPYVNML RATIATFSAG LGGADSLTVL PHTLALGLPD DFARRIARNT
QFILLEESSL AKVADPAAGS GGIETLTRQL CEAAWALFQE IEKAGGAFAA LTQSLIQRNV
VATRAAREAN VAKRRDVLTG ASEFPNLHEK PPEVLDAKPV ILAPYGETKI KFDALAPMRL
AAPYEKLRDR SDAMLAAIGA RPKVFLATLG TAADFTARAT FARSFFETGG IEAVDPPSPL
DVKTAALAAA FRASGAQLVC LCSSDHVYAD QAAAAVQAFH AAGARHIYLA GPPGKLETAL
RSAGVQDFIF AGGDALAVLS DAWRRLEQR
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