| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2463 |
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| Symbol | |
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| ID | 4033154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2723051 |
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| End bp | 2725192 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970922 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_577713 |
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| Protein GI | 92117984 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.718819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTTTG CATTATGGCG TGCCGGCAAA GATAAGACAC CGGTTTCGAA CACGGTATCG
GCGCCAATGC CTGCTGCGCC GAGCGTCTCG CCGCCGGGCG ACCTTGATTT GCGCGTCATC
TGGCAGGCGC TGCTGCGCAG GAAGCGCGCA ATCATCATCC CGACGCTTCT CGCCTTCGCC
CTTTCGCTTC TCGTCGTCAA TCTGATCACG CCCAGATACA AGTCCGAAGC CCGCATCCTG
ATCGACGGCC GTGAAAACGT TTTCCTGCGC CCGAATGGCG AGCGTAACGA CGAGCGCAAC
GCGCTCGATC CCGAAGCCGT CGCCAGCCAG GTGCAACTGG TGCTGTCGCG CGATCTTGCC
CGCGAGGTGA TCAAGAAAAA CCAGCTCGCG AAGAATCCGG AGTTCGATCC GGTGCTGCGC
GGCGTGTCGC CGATCAAATC GCTGCTGGCG CTGTTCGGAA TCGGCCGCGA CCCGCTCCGG
ATGACGCCGG AAGAGCGCGT GCTGGATGCC TACTACAGCC GGCTGACCGC CTACGCCGTC
GATAAATCCC GCGTGATCGT CATCGAATTC CAGTCGCGCG ATCCGGAACT CGCGGCTCGC
ATCGCGAATT CGGTCGCCGA CGGCTATCTC GTCCTGCAAC TGAGCGCGCG TCAGGAGCAG
GCGAAGGCCG CCGGTCAGTG GTTGTCCGGA GAAATCGACA GCTTGCGCAA GAAGGTCACG
GATGCCGAAT CGCGGGTCGC GGATTTCAGG TCGAAGTCCA GCCTCTTCAT CGGCACCAAC
AACACCTCCC TGTCGAACCA GCAACTGGGT GAAATCAACA CCCAACTGAA TAACGCGCGT
GCGCTCAAGT CCGATGCGGA ATCGAAGGCA CGACTGATCC GTGGGATGCT TCAGAGCGGC
AAACCGATCG AGGCCTCGGA GGTTCTCAAT TCGGAACTGA TCCGCCGCCT GTCCGAACAG
CGCGTGACGC TGCGCGCGCA ACTGGCGGAG CAGTCCTCGA CCCTGCTCGG TCAACATCCG
CGGATCAAGG AGTTGAAGGC CCAGCTTGCG GACCTCGATC GCCAGTTGCG CGAAGAGGCC
GGCAAGATAT CGCGGTCGCT CGAAAACGAC GCCCGTATCG CCAGCGGCCG GGTCGAGGGC
CTCAGCAACA GCCTCGAGCA GTTGAAGAAG CAGGCGACGT CGTCCAATGG CGACGATGTG
AAGTTGCGGG CGCTGGAGCG CGAGGCGAGG GCGCAGCGCG ACCTGCTGGA ATCCTATCTC
GCAAAATATC GTGAAGCCAC CACGCGCGAG ACCATCGACG CCGCACCGTC CGATGGCCGC
ATTATCTCGC GCGCCTTCGT CTCGAATACG CCGGCCTACC CGAAGAAGCT GCCCATCGTC
CTGATCGCGA CGCTGGCGAC GCTGATGCTG GCGGCCGGCA CTGTTGCGAC CGGCGAACTG
CTGCGCATCA CCGCTCCGCG GGCCCCGGCC GGGTTCGGTC CTGTCTCGCC GCAAGCCGCC
GCGGCGCCGG AGCCGCGCGA GCCCCGTCCC GATCCGGCGG CGAACCTGAC CGGGATCGAC
CGCCTCGCAG ACGACCTGCG GACCGCGGGC GAGGCGGCGC GCAAGATCAC GATCATGGGC
ACCGGCCAGA ACGAGAGCAT CATGCTGAGT GCGCTCGCGC TCGCGCGGCT GCTGGCGCAC
GGCGCCAAGG TTGTCCTGGT CGATCTGTCG CCCTCATCGC CGGTCCTGAC CGCCGCCTCG
GTCGATCCGG CGGCGCCGGG ACTGGCCGAC CTGATGCTGG GCGAGACGTC TTTCGGACAG
GTGATCACCC GCGACCGGCT GTCGGCGGTC CATCTGGTCG CCGCCGGACG TTCCGATGCC
GATCGTGCGC TGCTGCAATC GCCACGCCTG ACGATCGCGC TCGATGCCCT GCTGCGCGTC
TACGATCACG TCCTGCTCGT CGTCGGCACC GCGACCGATC TGCCGGCCAG GCTGCTGACC
GATCAGGCGC GCGCGATCGT CGTTCCCGAC CCGTCGATGA GCGTCGATGC GCGTGCACGA
TTGAGCGGGC AGCTCACGGC CATAGGCTTC GCGTCGGTGA CGATGCTCGA TCCGACGCCG
CAGCCGGCGG ACACCCAGAC AGGTCCCCGC GAGGCGGCCT GA
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| Protein sequence | MRFALWRAGK DKTPVSNTVS APMPAAPSVS PPGDLDLRVI WQALLRRKRA IIIPTLLAFA
LSLLVVNLIT PRYKSEARIL IDGRENVFLR PNGERNDERN ALDPEAVASQ VQLVLSRDLA
REVIKKNQLA KNPEFDPVLR GVSPIKSLLA LFGIGRDPLR MTPEERVLDA YYSRLTAYAV
DKSRVIVIEF QSRDPELAAR IANSVADGYL VLQLSARQEQ AKAAGQWLSG EIDSLRKKVT
DAESRVADFR SKSSLFIGTN NTSLSNQQLG EINTQLNNAR ALKSDAESKA RLIRGMLQSG
KPIEASEVLN SELIRRLSEQ RVTLRAQLAE QSSTLLGQHP RIKELKAQLA DLDRQLREEA
GKISRSLEND ARIASGRVEG LSNSLEQLKK QATSSNGDDV KLRALEREAR AQRDLLESYL
AKYREATTRE TIDAAPSDGR IISRAFVSNT PAYPKKLPIV LIATLATLML AAGTVATGEL
LRITAPRAPA GFGPVSPQAA AAPEPREPRP DPAANLTGID RLADDLRTAG EAARKITIMG
TGQNESIMLS ALALARLLAH GAKVVLVDLS PSSPVLTAAS VDPAAPGLAD LMLGETSFGQ
VITRDRLSAV HLVAAGRSDA DRALLQSPRL TIALDALLRV YDHVLLVVGT ATDLPARLLT
DQARAIVVPD PSMSVDARAR LSGQLTAIGF ASVTMLDPTP QPADTQTGPR EAA
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