Gene Nham_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2456 
Symbol 
ID4029290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2715808 
End bp2716236 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID637970915 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_577706 
Protein GI92117977 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.25854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCG CGAGAATGAG CGTGGCTGAG CTCGAGGCGT TTCTTCACGC TGAGTTCCCC 
CAGGCCTTCA GGGATGGCGA TATCGCAATC GAAAGCGCCG ACGGCGAAAC CTGCCTGCTG
CGCCAGCGCT ATAGCGAGCG GATGCTGCGC CCGGGCGGAA CGGTCTCCGG GCCGACGTTG
ATGGCGCTGG CCGATTTCGC CATGTATGTG GTGCTGCTGT CGCGGATCGG CCCGGTCGGC
CTCGCGGTGA CTGCCAACCT CAACATCAAT TTTCTGCGCA GGGGCCGCCC GGGTCAGGAC
GTGCTCGCCG CGGCGCGGCT GCTCAAACTC GGCAAGCGGC TGGCGGTCGG GGAAGTGACG
CTGCTGTCCG GCACCTCGCC CGACCCGATC GCCCACGTGA CATCCACCTA TTCCATTCCG
AATGCTTGA
 
Protein sequence
MAIARMSVAE LEAFLHAEFP QAFRDGDIAI ESADGETCLL RQRYSERMLR PGGTVSGPTL 
MALADFAMYV VLLSRIGPVG LAVTANLNIN FLRRGRPGQD VLAAARLLKL GKRLAVGEVT
LLSGTSPDPI AHVTSTYSIP NA