Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2336 |
Symbol | |
ID | 4033335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2600575 |
End bp | 2602452 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637970797 |
Product | ABC transporter related |
Protein accession | YP_577588 |
Protein GI | 92117859 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.590481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTATCCA TCACCGATAT TTCGATCCGC ATCGCCGGAC GGCTACTGAT CGACCATAGC TCCGTACAGA TCGTGCCCGG CGCGCGCGTC GGCTTTGTCG GCCGCAACGG CGTCGGTAAA TCGACGCTGT TCCATGCGAT CCGCGGTGAA CTCCCGACGG AAACGGGCAC CATCGCCATC CCGCCGCGCT GGCGCGTCGG CAGCCTTGCA CAGGAAGCTC CCGACGGCCC CGAGAGCCTG GTCGAGGTGG TGCTCAAAGC CGACCTCGAA CGCCACGCGC TGCTATGCGA AGCCGAAACG GCCCACGACC CGCACCGCAT CGCGGAAATC CAGACGCGTC TGGTCGATAT CGATGCCCAT TCCGCTCCGG CGCGTGCGGC GTCGATCCTG AGCGGCCTCG GATTCTCGGC CGCAGATCAG GCCCGCCCCT GTTCGGAATT CTCAGGCGGC TGGCGCATGC GCGTTGCGCT CGCGGCGACC CTCTTTGCCG CACCCGATCT GCTGCTGCTC GACGAGCCGA CCAACTACCT CGACCTCGAA GGCACGCTCT GGCTGGAGGA TCACCTCGCG ACCTATCCGC GCACGGTCAT CGTCATCAGT CATGACCGCG ATCTGCTCGA CACATCCGTC GATCAGATTC TGCACCTCGA TCGCGGCAAG CTGTCGCTCT ACAAGGGCGC CTATTCCTCC TTCGAAGACC AGCGCGCCAC CCGCGAGATG CTCGACGCCA AGCACGCCAG GCGGCAGGCC GATGAACGCA AGCGGCTCCA GGACTTCGTC GATCGCTTCA AGGCCAAGGC CTCGAAGGCG CGCCAGGCGC AGTCACGCGT GAAGATGCTC GAACGCATGA AGCCCGTGAC CGCGCTGGTC ACGCAGGACG TGCGTGAGAT TTCTTTCCCC GTGCCTGAAA AGCTGCTGTC GCCGCCGATC ATCGCCGTTG ACGAGGCGGT CGTGGGTTAC GACCCCGACC TGCCGGTGCT CAAAGGCGTG ACCTTGCGGA TCGACGAAGA CGACCGCATC GCCTTGCTCG GTGCCAACGG CAACGGCAAG TCCACCCTCG TCAAACTGCT TGCCGGAAAG CTGCAACCGT TTGCGGGCAA GGTGGTGCGC GCCGACAAAT TGTCGATCGG CTATTTCGCC CAGCATCAGA CCGATGAACT GGACCTCGAC GGCTCGCCCT ACGATCATGT GCGCCGGTTG ATGCTGGGTG CGCCGGAAAC GAAAATTCGC GCCCGCGTCG GCGCCATCGG CTTTTCCGGC AAGGCGGGCG ACACCCTCGT GAGAAGCCTG TCGGGCGGCG AAAAAGCGCG TCTTCTGCTC GGGCTTGCGA CATTCTACGC GCCGAACATG ATCATTCTCG ACGAGCCGAC CAACCATCTC GATATCGACA GCCGCGCCGT GCTTGCCGAA GCCATCAACG AATTTCCGGG CGCTGTCATC ATGGTCTCGC ACGATCGCTA CCTGATCGAA GCCTGCGCCG ACCAGCTATG GGTGGTCGCG GACCGGACCG TCACACCTTA CGATGGCGAC CTCGACGATT ATCGCCGCGC GGTTCTGTCG GCGCGCGGCC TGCGCACAAG CGCCCGCGAT CGTGGATCCA GTGAACGCGA CAACGGCCGC GACAAGCCTC AACGCACCAA GACGGAAAAG CGTGTGCCGC TGAAGCAGAA GATCGCGAAC GCCGAGGCGG AGATCGAGCG AATCACGGGT ATCATCGCAA AAATCGATGT CGCCCTCGCC TTGCCGGATC TGTTCAAGCG CGATCCCAAA CAGGCCGCGC AACTCAGCAA GGCGCGCGCC AGCGCCGCGA ACGCCCTGCA AAGCGCCGAA GAAAGATGGC TGGAGGCCAG CGCGTCATAC GAAGAAGCAC CAGGCTAA
|
Protein sequence | MLSITDISIR IAGRLLIDHS SVQIVPGARV GFVGRNGVGK STLFHAIRGE LPTETGTIAI PPRWRVGSLA QEAPDGPESL VEVVLKADLE RHALLCEAET AHDPHRIAEI QTRLVDIDAH SAPARAASIL SGLGFSAADQ ARPCSEFSGG WRMRVALAAT LFAAPDLLLL DEPTNYLDLE GTLWLEDHLA TYPRTVIVIS HDRDLLDTSV DQILHLDRGK LSLYKGAYSS FEDQRATREM LDAKHARRQA DERKRLQDFV DRFKAKASKA RQAQSRVKML ERMKPVTALV TQDVREISFP VPEKLLSPPI IAVDEAVVGY DPDLPVLKGV TLRIDEDDRI ALLGANGNGK STLVKLLAGK LQPFAGKVVR ADKLSIGYFA QHQTDELDLD GSPYDHVRRL MLGAPETKIR ARVGAIGFSG KAGDTLVRSL SGGEKARLLL GLATFYAPNM IILDEPTNHL DIDSRAVLAE AINEFPGAVI MVSHDRYLIE ACADQLWVVA DRTVTPYDGD LDDYRRAVLS ARGLRTSARD RGSSERDNGR DKPQRTKTEK RVPLKQKIAN AEAEIERITG IIAKIDVALA LPDLFKRDPK QAAQLSKARA SAANALQSAE ERWLEASASY EEAPG
|
| |