| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2255 |
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| Symbol | |
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| ID | 4033178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2506902 |
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| End bp | 2509211 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970715 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_577507 |
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| Protein GI | 92117778 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.3559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAC TGAGTTCTAT AGCGAGTTGG CCTCGCAGAA GGCAGCAGAT GCAGACCGCG
ACCAATTCGG TCGGGGAGGC TCCGACGCCG GCCGCCCCGG CCCCGGCCAG GCCGCCGCGC
CCGCGCATGA TGCGCCAGTA CGATCTGGTC GAGCGCGTTC GCTCCTACAA CCCGGACACC
AACGAGGATT TGCTGAATCG GGCCTACGTC TATGCCATGA AGGCCCACGG CGAGCAGATA
CGGGCGTCGG GCGATCCCTA TTTTTCCCAT CCGCTCGAGG TCGCGGCCAT CCTGACCGGC
CTCAAGCTCG ACGATGCCAC CATCGTCGCG GCGCTGCTGC ACGATACCAT CGAGGATACC
GAGGCCACCC GAGCCGAGAT CGACAACATG TTCGGTCACG AGATCGGTAC GTTGGTCGAG
GGCCTGACCA AGCTCAAACG GCTGGAACTG GTCTCGCGCG AGGCCAAGCA GGCCGAAAAC
CTGCGCAAGC TGCTGCTGGC GATCGCCGAA GATGTCCGCG TGCTGCTGAT CAAGCTTGCC
GACCGGCTGC ACAACATGCG CACCCTGGAA TTCGTGCCGC CGGCGTCGCG CCAGCGCATC
GCCGAGGAGA CTCTCGACAT TTATGCCCCG CTGGCTGGCC GCATGGGCAT GCAGGAGATG
CGCGAGGAGC TTGAGGATCT GGCGTTCCAC ACCCTCGATC CGGAAGCCCA TGCGGTGGTT
TCGCAGCGGC TCGACGCGTT GGCCGAGCGC AACCGAAACC TGATCGGCGA GATCGAGAAC
CAGCTCACGA CCAGTCTCGC GAACAAGGGC ATCACCGCGC ACGTGAATGG CCGTCGCAAG
CAGCCGTTTT CGATCTGGAC CAAGATGGAA CGAAAATCGG TCGGCTTCGA GCAGCTTTCG
GATATTTTTG GATTTCGCGT CGTGATGCCC GATGTCGGAG CCTGCTATCG TGCGCTCGGC
GTGGTCCACA CGACGTGGCC GGTCGTGCCC GGGCGCTTCA AGGACTACAT TTCGACGCCG
AAGCAGAACG ACTATCGCTC GATCCACACC ACCGTGATCG GACCGGGCAA CCAGCGTGTC
GAACTGCAAC TGCGCACCGG GGAGATGGAC CGCATCGCCG AATTCGGCAT CGCCGCACAT
GCTTTTTACA AGGATGGGGC GGGTTCGCCG ACCGAACTGC TCAACCGCGA ATCCAATGCC
TTTGCGTGGC TGCGCCACAC CATCGAAATG CTGTCGGAGA GCGTCAATCC GGAGGAATTC
CTTGAGCACA CCAAGCTCGA GTTGTTTCAC GACCAGGTGT TCTGCTTCAC TCCGAAGGGA
AAGCTGATCG CGCTGCCGCG GCACGCCAAT GTCATCGACT TTGCCTATGC GGTGCATACG
GATGTCGGCA ACAGTACGGT GGGTTGCAAG ATCAACGGCA AGTTCGCGCC GCTGTCGTCG
CAATTGCAGA ACGGTGATGA GGTCGAGGTC CTGACGTCGC TCGCCCAGTC CGCGCCGCCA
TCGGCCTGGG AATCGCTTGC GGTCACGGGC AAGGCGCGGG CCGCGATCCG GCGCGCCACC
CGGGCCGCCG TGCGCGGTCA GTATGTCAGC CTTGGCCGGC GGATCGTGGA GCGCCTGTTC
ACTCGCGTGA AAATCGAATA CGCCGACGAC AAGCTCACCG GCGCGTTGCC ACGGCTGGCG
CGCGCCACGA TCGAGGATGT GATGGCTTCG GTGGGTCGCG GGGAAATGCG CGCCTCCGAT
GTCGCGCGCG CGATGTACCC GGACTACAAG GAGGAGCGGG TGGGCGGCGC CGGCGCCAAG
AAGAGCCTGG CCGCGAAGCT CAAATTGAAA TCGGCGCCGG ATCCCGCTCG TGGCCCGTCG
GTAATCCCGA TCGGCGGCAT CAATTCGAAT TTGCCGATCA AGTTCGCGCC CAATGGCGGT
GCGGTACCGG GCGACCGCAT CGTCGGCATC ATCACGCCGG GCGAGGGGAT CACGATCTAT
CCGATCCAGT CGCCGGCGCT GACGGATTTC GAGGAAGAGC CGGAGCGCTG GCTCGACGTT
CGCTGGGATG TCGACGACAC CACGCCGCAG CGGTTTCCGG CGCGCATCGT TGTGGATAGC
CTCAACGAGC CCGGCAGCCT CGCGCAGGTC GCGACCGTGA TCGCCGAGCA CGACGGCAAT
ATCGACAATA TCAGCATGAC CAGGCGTTCG CCCGACTTCA CCGAAATGAC CATCGATCTC
GAGGTCTACG ATCTCAAGCA TCTCAGTGCT ATCATCGCCC AGTTGCGTGC CAAGGACGTC
GTGGCGCGCG TCGAGCGGGT CAATGGCTAG
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| Protein sequence | MKALSSIASW PRRRQQMQTA TNSVGEAPTP AAPAPARPPR PRMMRQYDLV ERVRSYNPDT
NEDLLNRAYV YAMKAHGEQI RASGDPYFSH PLEVAAILTG LKLDDATIVA ALLHDTIEDT
EATRAEIDNM FGHEIGTLVE GLTKLKRLEL VSREAKQAEN LRKLLLAIAE DVRVLLIKLA
DRLHNMRTLE FVPPASRQRI AEETLDIYAP LAGRMGMQEM REELEDLAFH TLDPEAHAVV
SQRLDALAER NRNLIGEIEN QLTTSLANKG ITAHVNGRRK QPFSIWTKME RKSVGFEQLS
DIFGFRVVMP DVGACYRALG VVHTTWPVVP GRFKDYISTP KQNDYRSIHT TVIGPGNQRV
ELQLRTGEMD RIAEFGIAAH AFYKDGAGSP TELLNRESNA FAWLRHTIEM LSESVNPEEF
LEHTKLELFH DQVFCFTPKG KLIALPRHAN VIDFAYAVHT DVGNSTVGCK INGKFAPLSS
QLQNGDEVEV LTSLAQSAPP SAWESLAVTG KARAAIRRAT RAAVRGQYVS LGRRIVERLF
TRVKIEYADD KLTGALPRLA RATIEDVMAS VGRGEMRASD VARAMYPDYK EERVGGAGAK
KSLAAKLKLK SAPDPARGPS VIPIGGINSN LPIKFAPNGG AVPGDRIVGI ITPGEGITIY
PIQSPALTDF EEEPERWLDV RWDVDDTTPQ RFPARIVVDS LNEPGSLAQV ATVIAEHDGN
IDNISMTRRS PDFTEMTIDL EVYDLKHLSA IIAQLRAKDV VARVERVNG
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