Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2177 |
Symbol | |
ID | 4032673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2420128 |
End bp | 2422785 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637970635 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_577430 |
Protein GI | 92117701 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCGGA TGCGGTCATC CTCGCTGTCG ATCGGCCAGA TCACCTTCGG CGGATTTTTG CTGGTGCTGG CGATCATGGT GATAACCAGC GTGGCCAACG TCGTCGCGAC GCGCCATCTC GACAATACCT TCGCCGAGTT GCAGCGGCTG GACAGCGTCG GCGACCTCGC CGAGGAAATC GACCGCCGTA TGAACGAATT GCGGCTGGCG GCGCGAGACT ACGTCACCGA TCCAGGTGCG CAGTCCAGCC GGGTGTGGGG GGCCGCATCG TCGCTGAACG AGTTGCTGAA GAAGACGCGT ATCAAGCTTG CGCCGGAACA GCAGGAGATG ATCGACGGCG TCACGACGCG GCTGGAGGCC TATCGCAGGG GCATAGAGCG GGTGACGGAC CTGATCGCAA GCCGCGCGGA GCTGATCGAG ACCCTGCCGC CGCTGCGTGA AAAACTCGAA ACAGTAATCG AGCAGGCGGC CGATCAGTCG GCCTCAAAAA CACTGTTTCG AGCCCAGAGC GATGTCGCCG CCGCACTGCT CGGGCATGAT CCCACCACCG CGGAGCGGTC GGCGGAAAAG ATGCGCGCCA TCCCCATCGG CGAGCCCGCA GTCCGTGCCG CCGTTGAGGC CTACGCCGAT GCCGTGATTG CGATATCGCT GCGGGAGCGT CAGATCGCCG ATCTCGACAG GGATGTGCTG GGCACCGAAG GCCGGATGAT CGGGCAGGTC ACGGAGTTGT TGCGCGAACT CAGCACGCAA CGCGAGCAGG TGCTGTCGCA CGACTTCGCG CGAACGCTGG CCGAAACCAA ATGGCAGAGC ATCGTTCTCG GCAGCGTAGG AATATTGATT GGCCTGCTTG CGGCGATGTT CGTGGTGCGA CGAACGATCC GGCCCTTAAA GGCGATCGCG AGGGCGATCC GGAAGTTGGC TGGCGGTGAA AAGGAGACGT CGATTCCCGC AACCGACGTC GATAACGAAA TCGGCGATAT CGCCCGCGCC GCCGAAGTGT TTCGCCGGAC GCTTGCTGAA GCGGACTCGG CGCGGGAAGC TGCCGTTCGC GCGCTTGCCG AGCAGCGTCT TGCCGAGGAG AGCTACCGCA AGCTGTTCGA AGGTTCGGTC GATGGCATCT ATGTTACGAC GCCGGGTGGT CAACTGCTCG ATGCCAACCC GGCGCTGGCG CGGATAATCG GCTATGACAC CCCGGACGAT CTGATGCGCG ATATCGGTGA CAGCGCGCAA ACGATCTACG TCGATCCGTA TGCGCGCGCC GAATACCAGT TGCGGATGGA ACGCGACGGG ACCGCCCGCG GGTTCGAGTA TCAGGTGCGC CAGCGCGATG GCGGCATTCT CTGGCTCTCC GACAGCGCGA CAGCGGTCCG CGATGAGAAT GGCCGCATCG TCCGCTATGA AGGGGTGGTT CGCGACATCA CCGAGCAGCG GCGCGCCGAA GAGGCGATCG CAGAAGGACG GCGCGTGCTG CAACTCGTGA TCGACACTGT GCCCGCGATG ATCAACGTCA AGAACGCCGA CCTGCGTTAC GTCCTGATGA ATCGCTACAT GGCGGGCATT TTCGCGATCG AACCGGCGGA TGCGATCGGG CGAACGACGA GCGACCTGAT GTCGCGTTAC GGTGCGGCAA AGACCGACGA GAACGACAGG CGGGTTCTTC AGAGCGGCAA GGAGCTTGGC TTCTACGAAG AAGAGTATGA GGATGCGTTG GGCACGATGC GGCAATGGCT GGTCAACAAG CTGCCGATCC GCGGCGCCGA CGGCCGCGTC GAGAACATCG TCACGGTCGC GCTTGATATC GGTGATCGTA AACGCAACGA ACAGGAAATG CGGCAGGCCA AGGACGCGGC CGAGACGGCG CTACGCAACC TGCGCGAAAC TCAGAACTCG CTGATCGAGG CGGAGAAGCT CGCGGCGCTC GGTCGTCTCG TGGCGGGCGT CGCTCACGAG GTCAACAATC CGGTCGGTAT CAGCCTGACG GTGGCCTCGT CGCTGGAGCG CAAGATTGCT CTGTTCGCCG AGGAAGTCGC GCGCGGGGGG TTGCGGCGTT CAAGCCTGAA CGATTTCGTC GCAACCAATC GCGATGCTGC ATCGCAGCTT GTCGCCAACC TCAATCGCGC CGCCGAATTG GTCCAGTCAT TCAAGCAGGT TGCCGCCGAC CGCAGCTATT CGGACAAGCG GACCTTCGAC CTCGGTGAAC TCACCGAGCA GGTCGTCATG AGTCTGCGTC CCGGCCTGCG CAAGCACAAT GTGACGCTGA CGGTCGATTG CGAACCCAAT CTCTCGATGA ACAGCTACCC CGGGCCTTAC GGCCAGGTGC TGACCAATCT TTTCCTTAAC TCGCTGGCGC ATGCCTTTCC GGATGGTAAG GGCGGCGCGG TCGATATCAA TGTGCGGGGA GCCGGCCGGG ACAATGTTGA AATCCTGTTT TCCGACAACG GCTGCGGCAT GAGCATCGAT GTGCGGCGCA AGGCGTTCGA CCCGTTTTTC ACGACGCGGC GCGATCAGGG CGGCACCGGT CTCGGTCTGC ACATCGTCTA CAACATCGTG ACGAACCGTC TCGGCGGGCG CCTCGATCTC GACTCCATAT CCGGGGAGGG GACGCGGGTT CACATCGTTT TGCCGCGCGT CGGGCCGATG GAGCTGGCTG CGGAGTAG
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Protein sequence | MQRMRSSSLS IGQITFGGFL LVLAIMVITS VANVVATRHL DNTFAELQRL DSVGDLAEEI DRRMNELRLA ARDYVTDPGA QSSRVWGAAS SLNELLKKTR IKLAPEQQEM IDGVTTRLEA YRRGIERVTD LIASRAELIE TLPPLREKLE TVIEQAADQS ASKTLFRAQS DVAAALLGHD PTTAERSAEK MRAIPIGEPA VRAAVEAYAD AVIAISLRER QIADLDRDVL GTEGRMIGQV TELLRELSTQ REQVLSHDFA RTLAETKWQS IVLGSVGILI GLLAAMFVVR RTIRPLKAIA RAIRKLAGGE KETSIPATDV DNEIGDIARA AEVFRRTLAE ADSAREAAVR ALAEQRLAEE SYRKLFEGSV DGIYVTTPGG QLLDANPALA RIIGYDTPDD LMRDIGDSAQ TIYVDPYARA EYQLRMERDG TARGFEYQVR QRDGGILWLS DSATAVRDEN GRIVRYEGVV RDITEQRRAE EAIAEGRRVL QLVIDTVPAM INVKNADLRY VLMNRYMAGI FAIEPADAIG RTTSDLMSRY GAAKTDENDR RVLQSGKELG FYEEEYEDAL GTMRQWLVNK LPIRGADGRV ENIVTVALDI GDRKRNEQEM RQAKDAAETA LRNLRETQNS LIEAEKLAAL GRLVAGVAHE VNNPVGISLT VASSLERKIA LFAEEVARGG LRRSSLNDFV ATNRDAASQL VANLNRAAEL VQSFKQVAAD RSYSDKRTFD LGELTEQVVM SLRPGLRKHN VTLTVDCEPN LSMNSYPGPY GQVLTNLFLN SLAHAFPDGK GGAVDINVRG AGRDNVEILF SDNGCGMSID VRRKAFDPFF TTRRDQGGTG LGLHIVYNIV TNRLGGRLDL DSISGEGTRV HIVLPRVGPM ELAAE
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