Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2111 |
Symbol | aspS |
ID | 4031941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2353144 |
End bp | 2354916 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637970569 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_577368 |
Protein GI | 92117639 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCGCT ATCGGTCCCA TACCTGCGGC GCGCTCCGCG ACAGCCACAT CGATCAGACG GTCCGCCTAT CCGGCTGGTG CCATCGCATT CGCGACCACG GCGGGGTGCT GTTCATCGAC CTGCGCGACC ACTATGGGTT GACTCAGTGC GTGGCTGATC CGGACTCGCC TGCCTTTGCG CAGGCCGAGA AGTTGCGATC GGAATGGGTG GTCAGGATCG ACGGCAAGGC CCGGCTTCGC CCCGCGGGCA CCGAGAATCC GGAACTGCCG ACCGGCCAGA TCGAAATCTA CATCAATGAG ATCGAGGTGC TGGGCCCAGC CGACGAACTG CCGCTGCCGG TGTTCGGCGA GCAGGAATAT CCAGAAGACA TAAGGCTTAA GTACCGTTTC CTCGACCTTC GTCGCGAGAA GCTTCACCAG AACATCATGA CCCGCGGCGC CATCGTCGAT TCGATGCGCA AGCGCATGAA GGAGCAAGGA TTCTTTGAAT TCCAGACGCC GATCCTGACG GCGTCGTCGC CGGAAGGCGC GCGCGACTTC CTGGTGCCGA GCCGCATCCA TCCCGGCAAG TTCTACGCGC TGCCGCAGGC GCCGCAGCAG TACAAGCAGT TGCTGATGAT GTCCGGCTTC GACCGCTACT TCCAGATCGC GCCGTGCTTC CGCGACGAGG ACCCACGCGC CGACCGGCTG CCCGGCGAGT TCTACCAGCT CGATCTCGAG ATGAGCTTTG TCGAGCAGGA TGATGTTTTT GCTGCAGTGG AGCCGGTCGT TACCGGCGTG TTCGAGGAGT TCGCCAAGGG CAAGCCGGTG ACAAAGAACT GGCCGCGGAT TCCGTTCGCG GAAAGCTTGC GCAAATACGG CACCGACAAG CCGGACCTGC GCAATCCGCT GCTGATGCAG GATGTCTCCC AGCATTTCCG CGGCTCCGGC TTCAAGGTGT TCGCGCGGAT GCTCGAGGAT TCGAAGAACC AGGTCTGGGC GATCCCGGGT CCGGGTGGCG GCAGCCGGGC GTTCTGCGAC CGCATGAATT CATGGGCGCA GGGCGAGGGC CAGCCGGGGC TCGGCTACAT CATGTGGCGT GAGGGAGGCG AGGGCGCGGG TCCGCTCGCC AACAATATCG GTCCGGAGCG CACCGAAGCG ATCCGCCAGC AGCTCGGCCT CAAGGCGGGT GATGCGGCGT TCTTCGTCGC GGGCGATCCG GCAAAATTCT GGAAGTTCGC TGGCCTTGCG CGCACCAAGC TCGGCGAGGA GCTGAACGTG ATCGACAAGG ACAGGTTCGA GCTCGCATGG ATCGTCGACT TCCCGATGTA CGAATACAAC GAAGATGAGA AGAAGGTCGA CTTCTCGCAC AACCCGTTTT CGATGCCGCA GGGCGGACTC GATGCGCTCA ACAACCAGGA CCCGCTGACG ATCAAGGCGT TCCAGTACGA CATCACCTGC AACGGCTACG AGATCGCCTC CGGCGGTATT CGTAACCACA GGCCGGAAGC CATGGTGAAG GCGTTCGAGA TCGCGGGCTA TGGCGAAAAC GACGTGGTCG AGCGTTTCGG CGGCATGTAC CGCGCGTTTC AATACGGCGC GCCGCCGCAT GGCGGCATGG CGGCGGGCGT CGATCGCGTC GTCATGCTGC TCTGTGGCAC CACCAACCTG CGCGAAATCT CACTGTTTCC GATGAACCAG CGGGCCGAAG ACCTCCTGAT GGGCGCGCCG TCCGACGTCA CGCCGAAGCA GTTGCGCGAG CTTCACATTC GGCTCAATCT GCCGCAGGAC TAG
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Protein sequence | MHRYRSHTCG ALRDSHIDQT VRLSGWCHRI RDHGGVLFID LRDHYGLTQC VADPDSPAFA QAEKLRSEWV VRIDGKARLR PAGTENPELP TGQIEIYINE IEVLGPADEL PLPVFGEQEY PEDIRLKYRF LDLRREKLHQ NIMTRGAIVD SMRKRMKEQG FFEFQTPILT ASSPEGARDF LVPSRIHPGK FYALPQAPQQ YKQLLMMSGF DRYFQIAPCF RDEDPRADRL PGEFYQLDLE MSFVEQDDVF AAVEPVVTGV FEEFAKGKPV TKNWPRIPFA ESLRKYGTDK PDLRNPLLMQ DVSQHFRGSG FKVFARMLED SKNQVWAIPG PGGGSRAFCD RMNSWAQGEG QPGLGYIMWR EGGEGAGPLA NNIGPERTEA IRQQLGLKAG DAAFFVAGDP AKFWKFAGLA RTKLGEELNV IDKDRFELAW IVDFPMYEYN EDEKKVDFSH NPFSMPQGGL DALNNQDPLT IKAFQYDITC NGYEIASGGI RNHRPEAMVK AFEIAGYGEN DVVERFGGMY RAFQYGAPPH GGMAAGVDRV VMLLCGTTNL REISLFPMNQ RAEDLLMGAP SDVTPKQLRE LHIRLNLPQD
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