Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2072 |
Symbol | |
ID | 4031246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2303646 |
End bp | 2304842 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970529 |
Product | cystathionine beta-lyase |
Protein accession | YP_577329 |
Protein GI | 92117600 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.23598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCT CAAAGGACGG CGGACCGACG GATTCGCTTC GAGCGGAAAC CAGACTGGTC GTTTCGGGTC GAGATACCGA GGCCCAAAAG GGGTTTGTCA ATCCGCCCGT CGTTCGCGGC TCGACCGTGC TCTACCCGAC CGCGGGTGAC CTTCACGCCC ATCGCGGAGA ATTCCATTAC GGACGGCACG GCACTCCCAC CACCCGCGCC TTGCAGGATG CGTTGACGGC GCTGGAAGGC CCGCAGTGCG CGGGCGTCGG GCTCGTTCCA TCGGGGGTGT CTGCGATCTC CACCGCGCTG CTGTCGGTGC TGAAGGCCGG CGATCACCTC CTTGTCTGCG ATAACGTCTA TCGCCCCACG CGGAATTTCT GCGACGGGCT GCTGGCCCGC TACGGAGTCG AGACCACCTA TTTCGATCCG CTGGTCGGTT CGGGTATCGC CGCGCTGTTT CGGCCCAACA CCCGCGCGGT CATGGCCGAG GCTCCGGGTT CTCAGTCCCT GGAGATGCCC GACGTTCCGG CGATCGCCGC CGTCGCGCAC GCGCGAGGCG CGCTCGTGGT CGACGACAAT ACGTGGGCCA CTCCCCTGTT CCGCCGCGCA CTCGAACAGG GCGTGGACAT CAGCATTCAG GCGGCGACCA AATACATCGG CGGACATTCC GACATCATGT TCGGAACCAT ATCCGCCAAC GCCAACGCGT GGCCGGCCGT CGCCGAGACC ATCAGGCTGC TCGGCGTCTG CGCGGGACCT GACGATGTGT TTCTGGCATT GCGAGGACTG CGGACACTCG CAGTCAGGCT CGCGCACCAC CAGCAAGCCG CGATCGACAT GGCGCAGTGG CTCGCGAGAC GGCCGGAAGT CGCGAGGGTC TTGCATCCGG CGCTCCCGGA CGATCCCGGC CACGCGATCT GGAAGCGCGA CTTCACCGGC GCGTCGGGGT TGTTCAGCAT CGTCCTCAAG CCCGCGCCAC AACAGGCCGT CGATGCGCTG CTCGATACGG TGAAGCTATT CGGCATGGGT TACTCGTGGG GCGGCTTTGA GAGTCTCGTC ATTCCCTTCG ATTGTGCGAC CTACCGGACT GCCACAACCT GGGCGCCGGG CGGCCCGACG CTGCGGCTCC ACATCGGGCT GGAGAGCGTG GATGATCTCA AGGCCGATCT CGACCGCGGG TTTGAAGCCG TCAACGCTCG GCGGTGA
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Protein sequence | MTLSKDGGPT DSLRAETRLV VSGRDTEAQK GFVNPPVVRG STVLYPTAGD LHAHRGEFHY GRHGTPTTRA LQDALTALEG PQCAGVGLVP SGVSAISTAL LSVLKAGDHL LVCDNVYRPT RNFCDGLLAR YGVETTYFDP LVGSGIAALF RPNTRAVMAE APGSQSLEMP DVPAIAAVAH ARGALVVDDN TWATPLFRRA LEQGVDISIQ AATKYIGGHS DIMFGTISAN ANAWPAVAET IRLLGVCAGP DDVFLALRGL RTLAVRLAHH QQAAIDMAQW LARRPEVARV LHPALPDDPG HAIWKRDFTG ASGLFSIVLK PAPQQAVDAL LDTVKLFGMG YSWGGFESLV IPFDCATYRT ATTWAPGGPT LRLHIGLESV DDLKADLDRG FEAVNARR
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