| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1997 |
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| Symbol | |
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| ID | 4031550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2217346 |
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| End bp | 2220678 |
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| Gene Length | 3333 bp |
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| Protein Length | 1110 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970454 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_577256 |
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| Protein GI | 92117527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.469294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC TTCCCGATAT CGAGGCGAGA AAAACTGCGC TGACTGCCGT GAACCGCACG
CTGTTGGTCG AGGCAGGAGC AGGCTCCGGC AAGACTTCAG TGATGGCGGG GCGCGTCGCG
GTGCTCTTAT CGAAGGGCAC GGAGCCAAAG CATATCGCGG CCATCACGTT CACGGAGTTC
GCTGCAAGCG AGCTTCGGCA GCGCATAGAG CGGTTCACTA CCGAACTATC ACTCGGCAGG
GTGCCGAAAG ATCTGCTTCA AGCATTTCCG GACGGTGTGG AAGCAGCGCA AAAGGAAAAT
CTTTCAAGGG CGCTCGGCGC ATTCGACCAA TTGATGTGCG GAACGATCCA CGGTTTTGCG
CAGGCCTTGA TCAAACCGTA TCCAGCAGAG GCGAATATCG ACCCCGGCGC CGACATCGTG
GATCCCGCTG AGGCCGAGCT TGCGTTTCAG GAGCGTTACG ACGCGTGGCT CAGGTCGCAG
CTGTCAGGCG ACCACGACGA CGGTCTGGTC GCTCAGATCG TACTTTCCGA TGTAGATGGC
GGACTGAAGT TCGTTGCTGA GGTCGCTCAA TTTCTCCGGA AGAACCGCGA CGCCACTTGC
GCGCAGATAG CCTGGTCCCA TCAGGGATTG ACCGATCTGA CGGCGGCCGT GGGACAGTTC
CAACAGGATC TGGCCGGCTA TGACTTCCTT GAACCGCAGA CTTCGGAATG CTGCAAAGTG
CTCGGAGAGA TCATCGCGAT CTTTCAAGGG CATGGGCTCG CAGTGCCGAT TCCAAGCAAC
GCTGCACTGG TCGCGGCGCT CGGTTTCCAC CGGCATGAGA CCTGCTTCAC ACAGGATGGT
AAGCGCAGAC AGCTTCGCGC CTCCACGAAA TGGCAGGAGG CCGCAGCGAA GGCCGGCCGA
CCAAAGGCAG CCGGGAAGAT GGCATCAGAA GCCTTGGTGC TTCGATACGA CGCCTGCCAT
GGGGCAATTT CGACGCTGAT TGGAGCCGTA TCGAGAGAGC TTCTTCTTCG TCTCTGCAAT
GAGATGGCAC AATTGCGGGA GGACTGGCGC GGCTACAAGC GGGCGGCCGC TTTGCTGGAT
TTCGACGATC TTCTCTACAA GGCCCGAGAC CTTCTCGCCA ACGACGCCGA AGTGCGAAAC
GCTCTTTCCA AGCGCTTCCG CCATGTCCTG GTCGACGAGT TTCAAGACAC CGACCCGCTT
CAGACCGAGA TACTATGGTT GCTCTGCGGC GATGATAGCG CGGGAGAGCC GCTGTCTCGT
CCGCTGCGTC CTGGCGCTTT GTTTCTCGTC GGCGATCCGA AGCAGGCCAT CTATCGCTTT
CGTGGCGCCG ACGTGAATGC GTACATCGCC GCACGGGCGG CGATCGCCCC GGGTTCGCTT
CTGAAGATCA CCGCGAATTT CCGTTCGGTC GAACCCATCC TCGCGTTCGT GAACAAGAAG
TTCGAACACG TGCTGTCCGA GAGTGCCGGA CAACCTGGCT TTTCGGAACT ATCGCCGATC
CACCCCGCCA GCGCTGATCC CGCGGTCGTG GCGCTCGACG TGACGGTGAA TGAAGAGAAG
CCGAGCGCGG GCGCGATGAG AGATGCCGAA GCGCTGGCAG TTGCGGACCT TTGTGGCCGG
TTGGCGGGAA ACATGATGGT GCGCGATCAC CACACGAACG AGCTCAGGAA GTGCCGCTTC
GGCGACATCG CTCTCCTGGC ACCTGTCGGC ACCGAGTTGT GGAGGTTCGA GGAGGCCCTC
GAAGATCTCG GCATCCCGGT TTCGACGCAG GCCGGCAAGG GTTTCTTCCG GCGCCAGGAG
ATCCAGGATC TCGTCGCGCT CACCTGCGCT TTGGCCGATC CGAGGGACAG CCTGGCTCTT
GGCGCGTTCT TGCGAGGTCC GATGGTCGGA CTTACCGAGA CCGAACTTCT GGACATCGCT
GAACAGTTGC CGAGCGATCC GGACCAGCCC AACCAGCTGC CTATGCTGTC GCTTCGGACG
GATCCGGATC AGATAGCCAA CGCGACAGCC AGCAATGCCA TACGCATCCT TGCGTTTCTC
CGTAACCGGG GTGGCAAGAC GACGCCGTAT TCGCTCCTTT CCGACGCTGT TGCCGCTTTG
CACGTTCGAC CTCAATTGCG TCAGCGCTTC AAGGAAGGTA CGGAGCGGGC AGTGGCGAAC
GTGGACCTTT TTCTCGAATT GGCTCGGGCA TACGATGTCC GCGGGCTGCG CGCTTTCGCG
AGAGACATGA GGGCGAACTG GGAGGAAACC GTTCGACAAG TCGAAGGCCG CCCTGATGCT
GAGGAGCAGT CCATTTCGCT GATCACGGTG CATTCTGCCA AGGGTCTGGA ATGGTCGGTC
GTGATCCCTT TGAATATGAC GGGCAAACCC CAATCGGAGA GCGGCTTGGC ATACGACAGG
TCAAGCAATC GGTTCTCCAT ACCCGTGCTG GGCAACGATC CTCCCGACTA CGACGGCATA
AAGTCGAAGA ACGTCGTCGA GTCGGCCAGG GAGAGGGTGC GGCTCTGGTA CGTCGCGACG
ACGCGTGCTC GCGATCTCCT GATCCTCCCG CGGCATTCAG CGAAGCTGGC GGAGGACAGC
TGGACCCGCA TCGTTGAGTT AGGATTGGAG CATTTGCCGG CTTTGGACGG GGCCGCTCTC
GGAGCACCTG GTCAAGCGCC GGCGAAGTCT GGGGAGAACC TGCAGACCCG CGAAATATTT
GCCGCTGAGG CATCAAGAAT TCTCGCCGAC AGGAAGGCCG TGACATGGCG CCGTCCAAGT
CGGGCGGAGC TTGATCCGCA CCAATCTGGT AACGTGGAAG CTGCGGTGGC GAGCGAAGCG
GTCGAAATTC CCCCGTCCGT TGTTGTAGGG AGCTCAACCC GAGGCGTCAT ATTGCATAAG
CTGATCGAGG AAATATTGTC CGGAGAGACG CAAGACACGC TCGAACGCTT AGAAATTCGG
GCCGGAGAAT TGCTGACTCA GATAGGAAGC GGAGCTGCAC AAAATACGCA GGCCGGCATC
TCGCCCGCCG AACTCTCCGC CACGGTGATG AGGACGCTCG CGCTGTCGGA GATCAAAGAA
CTGCGGCATC GGTTGGTCGC AGAATTGCCG GTCTTTGGAT GCTCGATCAC GGTGGATGGT
GAAACGCTCA TCTCGGGGTT GGCCGACGCT GTCGCTCTAG ACGAGAGCGG TGCCATCGAC
GTGGTAATCG ATTGGAAGAG CGATGTTGCG CCCGATGTCG CAGCCCTCGA TCACTATCGC
CAGCAGATCG GTGACTATCG CAAGCAGATG AACGCCAAGA GGGCTCTCGT GGTTCTCATG
ACGTCGGGCA AGGTGATCGA AGTCGCGGCC TGA
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| Protein sequence | MTVLPDIEAR KTALTAVNRT LLVEAGAGSG KTSVMAGRVA VLLSKGTEPK HIAAITFTEF
AASELRQRIE RFTTELSLGR VPKDLLQAFP DGVEAAQKEN LSRALGAFDQ LMCGTIHGFA
QALIKPYPAE ANIDPGADIV DPAEAELAFQ ERYDAWLRSQ LSGDHDDGLV AQIVLSDVDG
GLKFVAEVAQ FLRKNRDATC AQIAWSHQGL TDLTAAVGQF QQDLAGYDFL EPQTSECCKV
LGEIIAIFQG HGLAVPIPSN AALVAALGFH RHETCFTQDG KRRQLRASTK WQEAAAKAGR
PKAAGKMASE ALVLRYDACH GAISTLIGAV SRELLLRLCN EMAQLREDWR GYKRAAALLD
FDDLLYKARD LLANDAEVRN ALSKRFRHVL VDEFQDTDPL QTEILWLLCG DDSAGEPLSR
PLRPGALFLV GDPKQAIYRF RGADVNAYIA ARAAIAPGSL LKITANFRSV EPILAFVNKK
FEHVLSESAG QPGFSELSPI HPASADPAVV ALDVTVNEEK PSAGAMRDAE ALAVADLCGR
LAGNMMVRDH HTNELRKCRF GDIALLAPVG TELWRFEEAL EDLGIPVSTQ AGKGFFRRQE
IQDLVALTCA LADPRDSLAL GAFLRGPMVG LTETELLDIA EQLPSDPDQP NQLPMLSLRT
DPDQIANATA SNAIRILAFL RNRGGKTTPY SLLSDAVAAL HVRPQLRQRF KEGTERAVAN
VDLFLELARA YDVRGLRAFA RDMRANWEET VRQVEGRPDA EEQSISLITV HSAKGLEWSV
VIPLNMTGKP QSESGLAYDR SSNRFSIPVL GNDPPDYDGI KSKNVVESAR ERVRLWYVAT
TRARDLLILP RHSAKLAEDS WTRIVELGLE HLPALDGAAL GAPGQAPAKS GENLQTREIF
AAEASRILAD RKAVTWRRPS RAELDPHQSG NVEAAVASEA VEIPPSVVVG SSTRGVILHK
LIEEILSGET QDTLERLEIR AGELLTQIGS GAAQNTQAGI SPAELSATVM RTLALSEIKE
LRHRLVAELP VFGCSITVDG ETLISGLADA VALDESGAID VVIDWKSDVA PDVAALDHYR
QQIGDYRKQM NAKRALVVLM TSGKVIEVAA
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