Gene Nham_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1906 
SymbolfixJ 
ID4033044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp2121301 
End bp2121918 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID637970372 
Productresponse regulator FixJ 
Protein accessionYP_577174 
Protein GI92117445 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.700153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATA AGGGAAATGT CTATGTCATC GACGACGATC CTGCGATGCG GGACTCGCTT 
GATTTCCTCC TTGGCTCGGC AGGCTTCAAA GTCATGCTGT TCGACGCTGC CGCCGATTTC 
CTCAATGCTC ATGCCGGTCT TCGTTTTGGC TGCCTCATAT CCGACGTTCG CATGCCTGGC 
ATCGACGGAA TGGATCTGCT TCGACGCCTC AAAGCCAATG CTTCGCCCCT GCCCGTCATC 
ATCATGACCG GACACGGGGA TATTCCCCTC GCAGTTGAAG CGATAAAGTT GGGTGCGCTC 
GATTTCATTG AAAAGCCATT TGAAGATGAA CGACTGATCG GGATGATCGA GACCGCACTC 
CAACAGAGTC CCGGTCATGC GAAGAGTGAC GCCATCTCGG CGGAGATCGC ATCGAGGATC 
GCGAGTCTCA GTCAGCGCGA GCGTCAGGTC ATGGACGGCC TCGTCGCAGG GCTGTCCAAT 
AAGCTGATCG CCCGCGAACA CAACATCAGC CCCAGGACGA TTGAGGTTTA CCGGGCAAAT 
GTCATGACCA AAATGCAGGC ACATAACCTG TCCGAGCTGA TCCGGCTTGC GCTACGCGCA 
GGCATTTTGA ACGATTGA
 
Protein sequence
MSHKGNVYVI DDDPAMRDSL DFLLGSAGFK VMLFDAAADF LNAHAGLRFG CLISDVRMPG 
IDGMDLLRRL KANASPLPVI IMTGHGDIPL AVEAIKLGAL DFIEKPFEDE RLIGMIETAL 
QQSPGHAKSD AISAEIASRI ASLSQRERQV MDGLVAGLSN KLIAREHNIS PRTIEVYRAN 
VMTKMQAHNL SELIRLALRA GILND