Gene Nham_1885 details

Gene Information

• Locus tag: Nham_1885
• ID: 4029589
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 2097048
• End bp: 2097713
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637970353
• Product: two component transcriptional regulator
• Protein accession: YP_577155
• Protein GI: 92117426
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGTGC TTGTTGTCGA GGACGACCAG CGGATCGCGG CGGATGTCTC ACGCACGCTC 
GAAGCGTCCG GTTACGTGGT TGAAACGGTT GCGAACGGCG AGGACGCTTG GTTCCTTGGC 
GACACCGAGG ACTATGGCGC CGTCATTCTC GATCTTGGCT TACCCGGGAT GGATGGCCTC 
GCGGTTTTGA AGCGCTGGCG CGCCAATGGA CGCCACATGC CTGTCCTCGT TCTCACTGCG 
CGAGGAAGCT GGGCCGAGCG GGTGGACGGG ATCGACGCTG GCGCCGACGA TTACTTGCCG 
AAACCATTCC GGATGGAGGA GTTGCTGGCG CGGCTGCGGT CCATCGTGCG GCGCTCAGCG 
GGGCATGGTT CCTCGGTTAT GACCGCGGGC GAGATCACCC TGGACGAGCG GCAGATGAAG 
GTGACCCGAC GAGGCGTGCC GATTGCGCTT TCGCCGCTTG AGTACCGGCT TATCGCTCAT 
CTCCTGCGGA ATCGAGGGCG GGTCGTCTCG CAGCAGGAGC TCGACGAGAA CATCTACGGT 
CACGGCGAAG AGCACGACTC CAACACGCTC GAGGTGCTGG TCGGCCGCGT ACGCAAGAAG 
CTCGGCGCCG ATGTGATCGA AACGCGGCGC GGCTTCGGCT ATCTGATGCC GGAGGCCCCG 
GCATGA 

 

Protein sequence

MRVLVVEDDQ RIAADVSRTL EASGYVVETV ANGEDAWFLG DTEDYGAVIL DLGLPGMDGL 
AVLKRWRANG RHMPVLVLTA RGSWAERVDG IDAGADDYLP KPFRMEELLA RLRSIVRRSA 
GHGSSVMTAG EITLDERQMK VTRRGVPIAL SPLEYRLIAH LLRNRGRVVS QQELDENIYG 
HGEEHDSNTL EVLVGRVRKK LGADVIETRR GFGYLMPEAP A