Gene Nham_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1867 
Symbol 
ID4029953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2079471 
End bp2080730 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content57% 
IMG OID637970339 
Productmajor facilitator transporter 
Protein accessionYP_577141 
Protein GI92117412 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATG CTCCGTACTC ACCCGAGACT AGATCGTCGC CTTCGCCACA AGAACAATCG 
CATTCCAATC TCTTGCTCCT ATATGTGGCG CGAGGCGTAC GCGGTCTCGG CGACGGATTC
ACCGTCATTC TCCTGCCTGC ATATCTCTCG GCGATCGGTT TGAGTCCTGC TCAAATCGGG
ATCATCGCGA CCGCTTCACT CCTTGGGACA GCCACCCTGA CACTCGGGAT TGGGTGGATC
GCACCGCGTC ACGATCTACG CAGCCTGCTT CTGATTGGCG TGTTCCTGAT GACATTCACA
GGACTTGCCT TTGCGAACGT CGAGTATTTT CCGTTCATCG TGATCGTGGC GTTCGTCGGC
ACGATCAATC CGTCGAGCAG CGACATCGGC ATGCTTGTAC CTTTAGAGCA TGCCATGCTG
GCGCGCGGCG CTTCGGACAG GGACCGGACC AGTACTTTCG CTCGCTATAG CCTCATCGGC
GCCCTTTCGA TGGCCACGGG TTCGCTCGCG GCAGCCATTC CCGATCTTAT GGTCTCTTTC
GGGTTCGAAA GACTGAACGC GTTCGCGTTG ATGTTTTACC TGTACGCGTG TCTCGCGGTG
GTGGCGACCG GTCTCTACCG ACACCTGCCC CGCTCGCATA CTGAGGTCGC CAAAACTCAA
CCTCCCCTCG GTCCCTCGCG CACAATCGTC TATAAACTTG CTGCGCTGTT CAGCATCGAT
GCCTTTGCGG GAGGGTTCGT CGTTCAATCG TTGATGGCGC TCTGGCTGTT CTTGCGATTC
GACTTGTCGC TCACACAAGC AAGCTTATTT TTCTTTTGGT CCAGTCTTCT TTCCGCATTC
TCGTACCCGA TCGCGGCACG TCTTGCACAG CGATTCGGCC TCGTGAACAC CATGGTGTTC
ACGCATATTC CTTCGAGTCT CTGCCTGATC ATCGCCGCTA TCGTGCCGGA TCTGACGACG
GTATTGACGC TGTTGCTTGT CCGCTCCGCA CTGTCGCAAA TGGACGTACC AACGCGCACA
TCCTATGTGA TGGCCGTCGT GACCCCTGAA GAACGGCCCA CAGCAGCCAG CGTGACGGCG
GTCCCTCGTA CACTCGCCTC ATCCGTCAGC CCCATGTTTG CAGGAGCCCT GCTCGCGACT
GCGCTTCCAG GGTTACCGCT CATAATCTGC GGCACGCTCA AGATCGGTTA CGATCTGGCC
CTTCTATATT CATTTCGCCA CATCAGGCCG CCGGAAGAAA GCTCCAAATC CGTTCATTAG
 
Protein sequence
MADAPYSPET RSSPSPQEQS HSNLLLLYVA RGVRGLGDGF TVILLPAYLS AIGLSPAQIG 
IIATASLLGT ATLTLGIGWI APRHDLRSLL LIGVFLMTFT GLAFANVEYF PFIVIVAFVG
TINPSSSDIG MLVPLEHAML ARGASDRDRT STFARYSLIG ALSMATGSLA AAIPDLMVSF
GFERLNAFAL MFYLYACLAV VATGLYRHLP RSHTEVAKTQ PPLGPSRTIV YKLAALFSID
AFAGGFVVQS LMALWLFLRF DLSLTQASLF FFWSSLLSAF SYPIAARLAQ RFGLVNTMVF
THIPSSLCLI IAAIVPDLTT VLTLLLVRSA LSQMDVPTRT SYVMAVVTPE ERPTAASVTA
VPRTLASSVS PMFAGALLAT ALPGLPLIIC GTLKIGYDLA LLYSFRHIRP PEESSKSVH