| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1804 |
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| Symbol | |
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| ID | 4032981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2005293 |
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| End bp | 2006726 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970276 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_577078 |
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| Protein GI | 92117349 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.521526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGA TCGAACTCTC CTGCTCTGCC GTCCATATCA TCGGCGCCGG CCTCGCCGGC
TCGGAAGCCG CCTGGCAGGT CGCAAATCAC GGCGTTCGGG TGGTGCTGCA CGAGATGCGG
CCGCACCGGA TGACGGCGGC GCACCAGACC GGCGGCCTCG CTGAACTCGT CTGTTCCAAT
TCGTTCCGCT CCGACGATGC CGCCAACAAC GCGGTCGGAC TGCTGCACGC CGAGATGCGC
CGGCTGGGAT CGCTGATCAT GCGCTGCGCC GATGCCAATC AGGTTCCGGC CGGCGGAGCG
CTCGCGGTGG ACCGTGACGG CTTTTCGTCC GCCGTGACCA AAGCTCTCGA TGATCATCCG
CTGATCGAGA TCAACCGAAC TGAGGTCGAT GGCCTGCCGC CGGCGGACTG GCGCAACGTC
ATCGTCGCCA CGGGTCCCCT CACCTCGGCT CCCCTCGCCG CAGCGATCCG CGCATTGACC
GACGAATCCG CGCTGGCCTT TTTCGACGCG ATTGCGCCGA TCGTCCACCG CGACTCCATC
GATATGTCGA AGGCCTGGTT CCAGTCGCGC TATGACAAGG TCGGTCCGGG CGGCACCGGC
GCCGACTACA TCAATTGCCC GATGACAGAG GCGCAGTATC ACGCCTTCGT GGACGCGCTG
ATCGAGGGTG AGAAGGTCGA CTTCAAGGAC TGGGAGATCG ATACGCCCTA CTTCGACGGC
TGCCTGCCGA TCGAGATCAT GGCCGAACGC GGCCGCGAGA CCCTGCGCCA CGGGCCGATG
AAGCCGGTCG GCCTCACCAA TCCGCACGAT CCGACAGTGA AGCCATACGC CATCGTGCAG
TTGCGTCAGG ACAACAGGCT CGGCACGCTT TACAATATCG TCGGTTTCCA GACCAAGCTG
AAGCACGGCG CGCAGACCCG CGTCTTCCGC ACCATTCCGG GCCTCGAGAC CGCGGAGTTC
GCCCGCCTCG GCGGCCTGCA TCGCAACACG TTCCTGAATT CGCCAAAGCT GCTCGACACC
CAGTTGCGTT TGCGCGCCGA GCCGCGGCTG CGCTTTGCCG GGCAGATGAC GGGATGCGAA
GGTTACGTCG AATCCGCCGC TATCGGCCTG ATCGCCGGCC TCTATGCCGC GTCGGACGCG
CGGGCGCGGA GCCTCGCGGC TCCGCCGCCG ACCACGGCGC TCGGCGCGCT GCTCGGCCAC
ATCACCGGCG GTCACATCGA AAGCATCGAC GCCGGGCCTC GCTCATTCCA GCCGATGAAC
ATCAACTTCG GACTGTTTCC GCCGCTTGCC AATCCGCCAG CGAAGAAGCC GGACGGCACG
CGGCTGCGCG GCAACGAGAA GACGATCGCG AAAAAGCAGG CTATCAGTGC GCGCGCGCTC
GCGGACCTCG ATCGCTGGAT CGCGGATGCG CTCCGCGTTG CGGCCGCCGC ATAA
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| Protein sequence | MTQIELSCSA VHIIGAGLAG SEAAWQVANH GVRVVLHEMR PHRMTAAHQT GGLAELVCSN
SFRSDDAANN AVGLLHAEMR RLGSLIMRCA DANQVPAGGA LAVDRDGFSS AVTKALDDHP
LIEINRTEVD GLPPADWRNV IVATGPLTSA PLAAAIRALT DESALAFFDA IAPIVHRDSI
DMSKAWFQSR YDKVGPGGTG ADYINCPMTE AQYHAFVDAL IEGEKVDFKD WEIDTPYFDG
CLPIEIMAER GRETLRHGPM KPVGLTNPHD PTVKPYAIVQ LRQDNRLGTL YNIVGFQTKL
KHGAQTRVFR TIPGLETAEF ARLGGLHRNT FLNSPKLLDT QLRLRAEPRL RFAGQMTGCE
GYVESAAIGL IAGLYAASDA RARSLAAPPP TTALGALLGH ITGGHIESID AGPRSFQPMN
INFGLFPPLA NPPAKKPDGT RLRGNEKTIA KKQAISARAL ADLDRWIADA LRVAAAA
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