Gene Nham_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1789 
Symbol 
ID4032966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1990298 
End bp1990834 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID637970261 
Producttwin-arginine translocation protein TatB 
Protein accessionYP_577063 
Protein GI92117334 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACA TCGGGTGGAG TGAACTGGTC GTCATCGCGG TCGTCGCGCT GATCGCCATC 
GGCCCGAAAG AGTTGCCGGG CGTGCTGCGC ATGGTCGGGC AGTGGATGGG CAAGGCGCGC
AGGATGGCCG CCGAATTCCA GGGCCAGTTC AACGAGGCGA TGCGCGAGGC CGACATGGCC
GAGCTGAAGA AATCCTTCGA CGAGGTGCGC GACGCCACCA GTGGCCTGAC CAGTGGCAAC
CTGATGACCA AGCTGACCGA CTCGCTCGGC GAGCCGCCAA AGCTTGAGGA TCTCGACAAG
CCCGCAGCCA ACAGGCCCGC AGCCGATATG TCTGCCGCGT CTGCCAACGA CGTTCCGGCA
AGCGGATCGA TCGCACCGGA GGCCGCGATC CCCAAGACCG GGACGGAGGC GGACGCCAAG
GCCCTCGCAT CCGAGCCGCT GGCGATCACG CCCGAATTCC AGCACGCCAC GCCCGAGCCG
GCTCCGGCTA CGCACGAGAC GCCGCACGAG GCAGTCAAGG ACGCCAAAGC GTCATGA
 
Protein sequence
MFDIGWSELV VIAVVALIAI GPKELPGVLR MVGQWMGKAR RMAAEFQGQF NEAMREADMA 
ELKKSFDEVR DATSGLTSGN LMTKLTDSLG EPPKLEDLDK PAANRPAADM SAASANDVPA
SGSIAPEAAI PKTGTEADAK ALASEPLAIT PEFQHATPEP APATHETPHE AVKDAKAS