Gene Nham_1767 details

Gene Information

• Locus tag: Nham_1767
• ID: 4032942
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1970429
• End bp: 1970989
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637970237
• Product: peptidyl-prolyl cis-trans isomerase, cyclophilin type
• Protein accession: YP_577041
• Protein GI: 92117312
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.510342
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAGAA TCCTTGGCCT CGTCGCCGCG CTGATGTTCG CGATCCCCGC TGTCGCCCAA 
CCGCTGCCGG GCAACCTCGA CAAGCAGAAC GCGATCGTGA TCGAGACCAC GAAGGGCACC 
ATCGTCATCA AGCTGCGGAC CGACATCGCG CCCAAACATG CCGAGCGCAT CAAGCAGCTC 
GCCCGCGACG GTTTCTACAA CAACGTTCCG TTCCATCGCG TCATGGACGG CTTCATGGCG 
CAGACCGGCG ACGGCCAGAA TTTCAACGGC ACCGGCGGAT CGAAATATTC GAACCTCAAG 
GCTGAGTTCT CCAACGTGCC ATTCAAGCGC GGCGTGGTCG GAATGGCGCG CGCGGGAAGC 
CCAGACTCGG CAAACTCGCA GTTTTTCATC TGCTTTGCCG ACGCTTCCTT CCTCAATGGC 
AAATACACCG TGGTGGGTGA CGTCGTCTCC GGCATGGATG TGGTGGACAA GCTGAAGAAG 
GCGCCCGCCG GCTCGGCGAG CGGCACCGTC ACCGATCCGG ACAAGATGCT GAAGGTTCAG 
GTTGCTTCCG ACATCAAGTG A 

 

Protein sequence

MIRILGLVAA LMFAIPAVAQ PLPGNLDKQN AIVIETTKGT IVIKLRTDIA PKHAERIKQL 
ARDGFYNNVP FHRVMDGFMA QTGDGQNFNG TGGSKYSNLK AEFSNVPFKR GVVGMARAGS 
PDSANSQFFI CFADASFLNG KYTVVGDVVS GMDVVDKLKK APAGSASGTV TDPDKMLKVQ 
VASDIK