Gene Nham_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1717 
Symbol 
ID4030317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1919711 
End bp1920931 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content60% 
IMG OID637970189 
ProductPhage portal protein, HK97 
Protein accessionYP_576993 
Protein GI92117264 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTTGGT TCAGCCGTAA ATCCGAGCCG GTGCCGGAAA CGAAATCCGA ATTGACCGAT 
TGCACGTCGG ATAGTTGGGC TGCGCTTTGC GATGCCTTCG CCGTGTCCGC GTCGGGCGTG
ACCGTCACGG TTGACGCCCT TATGCGATGC CCCCCTGCCG AGGCGGCAGT TAGCATCACG
TCAAATTCCA CGGCAGGCGT GCAGTGTCGA TTGTTGCATG ATGATGCTGA CGATTCCGAG
CGGGCCGCAA AACAACATCC AGCCTATCAG CTTGTGCATG GCTTCAGCAA TGAATGGATG
TCGGCTGGTG AGATTCGCCG TCGAGTTACG CTGGACGCGA TCATCTTTGG CGATGGCTTC
GCGCTGGTGA CGCGCACCGC CGATCGGCCA GCGGAGATCC TTTACGTGCC GCGGCAGGTC
GTGGTGCTTG AGTACAAGCC TGATGGCGAG CCGGTCTATC GGATCGACGG CCGCGAGTAT
GGGCCGGCCG ACGTCGTTCA TCTGCAGACG CCAAACCCGA GCAGTCCACT GCAACAGCGA
GGATTAGGTC TGTTGCATAC GGGCCGCGAT GCTATTGGCT TGGCGATCTT GCTTGAGCGC
AGCGCGTCGC AACTGTTTAA GAATAACAGC CGGCCCGGTG GCGTGCTTTC CTTCAAGGGC
AGCTTGAACG CCACCGCAGC CGGCCGGATT GCCCAGATGT GGCGATCGGC TCACGGCGGC
GACAAGGCGG GCGGCATCGC GGTTATCGAC AACGAGGGTT CATACACCCC GATTGCCTTT
AGCTCCGTCG ATAGCCAGGC AATCGAACAA CGCGCTTTTG TGGTCAGTGA AATCTCGCGA
TTGACGCGAG TCCCGGCCAC GCTGTTGAGC GACATGAGCC GCGCGACGTG GTCCAACAGC
GTCCAGCTCG ATCTCCAGTT TGTGAAGTAC GGCCTCCAGC CGTGGTTGCG CGCGTGGTGC
GATGCCTATG CTCGCACGCT GTTGACGCCT GAAGAGCGGG CAACAATGCA CTTCGAGTTC
GATCTGTCGC AACTGTTGAT GGCCGACCCC GCCGCTCGCG CAACCGCATT CGGCCAGTAT
CGGTCCGCCG GCGTGATGAC GGCCAACGAT GTGAGGCGGG AACTTAACTT GCCGCCGCTT
CCTGATGGCG ACGTGCTGGC AAGCCCGCAT GTTCAATCAT CAGCAAATGA CAACCAACCC
AAGAAGGATC AAGCGGCTTG A
 
Protein sequence
MGWFSRKSEP VPETKSELTD CTSDSWAALC DAFAVSASGV TVTVDALMRC PPAEAAVSIT 
SNSTAGVQCR LLHDDADDSE RAAKQHPAYQ LVHGFSNEWM SAGEIRRRVT LDAIIFGDGF
ALVTRTADRP AEILYVPRQV VVLEYKPDGE PVYRIDGREY GPADVVHLQT PNPSSPLQQR
GLGLLHTGRD AIGLAILLER SASQLFKNNS RPGGVLSFKG SLNATAAGRI AQMWRSAHGG
DKAGGIAVID NEGSYTPIAF SSVDSQAIEQ RAFVVSEISR LTRVPATLLS DMSRATWSNS
VQLDLQFVKY GLQPWLRAWC DAYARTLLTP EERATMHFEF DLSQLLMADP AARATAFGQY
RSAGVMTAND VRRELNLPPL PDGDVLASPH VQSSANDNQP KKDQAA