Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1703 |
Symbol | lpxD |
ID | 4030303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1903907 |
End bp | 1904992 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637970175 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_576979 |
Protein GI | 92117250 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAC CCGCATTCTT TAAGCAGCCG CCGCCGTTGA CGCTGGTGGA GATTGCCGCA TCGACGGGGG CGCAGTTAAT CGACGCCTCC CGTGGTGAGC AGCGGATTAC CGGCCTCGCT TCGCTCGACC AGGCCGGGCC GATGCATCTC ACGTTTTTTG ACAATCACAA GTATGCCGCG CAACTGGCGG CGACCAGGGC GGGCGCCTGT TTCGTCAGCC CGCGATTCGA GGCCAGCGTA CCGGGCCACG TGGCTGTTCT GCGATCGGCG GCCCCGTTTC GTGCGTTCGT GAGGATCGCG CGAGACTGTC ATGCCGATAC GCTCCGGCCG CAATCCTGGT TCGACAATGC AACCATCGCG GCCTCCGCCG TCGTTCATCC GTCCGCGCAT CTCGAAGACG CGGTCGTCGT TGACCCGCTG GCGGTAATCG GTCCCGGAGT CGAAATCGGC ACCGGTTCGG TCATCGGTTC GGGCGCGGTG ATCGGCCCGG GTGTGCGGAT CGGCAGGAAT TGCAACGTCG GCGCAGGCAC GACGATCCAG GTTGCTCTTA TCGGCAACAA TGTTCTCATC CATCCCGGCT GTCATATCGG GCAGGATGGC TACGGCTTCA TTTTCTTCGG CTCCGAAGGC CATGTTAAGG TTCCGCAGAC CGGGCGCGTG CTGATCCAGA ACGATGTCGA GATCGGCGCC GGCACAACCA TCGATCGCGG CAGCCTGCGC GACACGGTGA TCGGGGAGGG GACCAAAATC GACAACCAGG TCCAGATCGG CCATAACGTG ACGATCGGCC GACGCTGTCT GCTGGCGGCC CAAATCGGCT TGGCGGGTAG CTTGACGATC GGCGACAACG TGGCGCTGGG CGCCAAGGTC GGGATCAATA ACCACCTTCA CATCGGTGAC GGCGCGCAGG TCGTTGCCAT GAGCGGGGTC AAGGACGATA TCCCTCCAAA CGGCCGCTGG GGCGGTTATT TCGCGAAACC GACCAGGCAG TGGTACCGCG AGCTCTTTGC GGTGGAGCGC TTGGCGCGCG ATGGTGCGCC CAACGCCGGA TCGGCCACGC CAGATCCAAC GGATCGAGGT GCATGA
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Protein sequence | MTQPAFFKQP PPLTLVEIAA STGAQLIDAS RGEQRITGLA SLDQAGPMHL TFFDNHKYAA QLAATRAGAC FVSPRFEASV PGHVAVLRSA APFRAFVRIA RDCHADTLRP QSWFDNATIA ASAVVHPSAH LEDAVVVDPL AVIGPGVEIG TGSVIGSGAV IGPGVRIGRN CNVGAGTTIQ VALIGNNVLI HPGCHIGQDG YGFIFFGSEG HVKVPQTGRV LIQNDVEIGA GTTIDRGSLR DTVIGEGTKI DNQVQIGHNV TIGRRCLLAA QIGLAGSLTI GDNVALGAKV GINNHLHIGD GAQVVAMSGV KDDIPPNGRW GGYFAKPTRQ WYRELFAVER LARDGAPNAG SATPDPTDRG A
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