| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1693 |
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| Symbol | dnaE |
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| ID | 4029397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1889847 |
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| End bp | 1893353 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970165 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_576969 |
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| Protein GI | 92117240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.859046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA AACTCGCCGC CGCCAACGCC GGTTTCGTCC ACTTGCACGT CCATTCGGCC
TATTCGCTTT TGAAGGGCTC GATCAAGATC CAGAAACTGG CGGAACTGGC CAAGGCCGAC
CATCAACCGG CATTGGCGCT GACCGACACC GACAATATGT TCGGTGCGCT GGAGTTTTCC
GACAAGGTCG CGGGTTACGG AATCCAGCCG ATCGTCGGGT GCGAACTGGC GGTCGATTTC
GACGATCAGG ATCCCAATGC GCGCAGCGCG CTTCCCTTCG CCCGAATTGT TCTGCTGGCG
ACGCGCGAGG CCGGTTATCG CAACCTGATG CGGCTGAATT CCCGCGCGTT CCTCGAATCG
GCGCTGCATC AGACCCCGCA TATCAAGTCG GGGTGGCTTC GGGATGAAAA CGAAGGGCTG
ATTGCCTTGA CCGGTGGCCC CGACGGGCCG GTGGCGCTGG CGTTCAATGC CGATCATTCG
GCTCTCGCTA TCGCGCGTTG CGATCAACTC GCCGGGGTTT TCGGTGACCG GCTCTATGTC
GAGTTGCAGC GTCATGGCCT TGACAAGGAG CGGCGCGTCG AAGGCGCGTT GATCGACCTC
GCCTATGCCA AGGGTCTGCC GCTGGTCGCG ACCAACGAAC CGTATTTCGC AGCCTCCGAC
GATTATGAGG CCCACGATGC CTTGCTGTGT ATCGCCGGCG GCCGCCTCGT CGCGGAAACC
GACCGCGATC AACTGACGCC GGATCATCGC TTCAAGACCC GCGCGGAAAT GGCCGTGCTG
TTTGCCGACA TTCCGGAAGC GTTGTCGTCT ACGATTGAAA TTGCGGAACG TTGCGCGTTC
CGGCCCCTGA CGCGCAAGCC GATCCTGCCG CATTTCGCGG TCGGCGCCGG CGCCAACGCG
GCGGATGCGA AAAGCGATGA GGTCGCCGAA TTGCGGCGCC AGGCGGAAGA GGGGCTTGCC
AACCGGCTGG CGGTTCATGG TCTTTCCCAG GGAATGACGG AGGACGACTA CAGCGCGCGC
CTGAGTTTCG AACTCGACGT CATCACCCGC ATGAATTATG CGGGCTACTT CCTGATCGTT
GCGGACTTCA TCAAGCACGC CAAGTCCGAG GGCATTCCAG TGGGGCCGGG CCGGGGCTCC
GGCGCTGGCT CGCTGGTGGC CTATGTGCTC ACCATCACCG ATCTGGATCC GATCCGGTTC
GGTCTGCTGT TCGAGCGCTT CCTCAACCCC GAACGCGTGT CGATGCCGGA CTTCGATATC
GATTTCTGCC AGGAGCGGCG CGGCGAGGTC ATCGACTACG TGCAGAAGCG CTACGGTCGC
GATCAGGTCG CGCAGATCAT CACCTTTGGA ACGCTTCAGG CGCGCGGCGT TTTGCGTGAC
GTCGGACGCG TCTTGCAGAT GCCTTATGGG CAGGTCGACA AGCTGACCAA GCTGGTCCCG
CAAAATCCAG CAGCGCCCAT TACGCTGGCC GCGGCGATCG CGAGCGAACC GAAGCTGCAG
GCGTTTCGCG ACGAGGATCC GGTGGTGGCG CGCGCGTTCG ATATCGCCCA GCGCCTCGAG
GGGCTGACCC GTCATGCCTC GACCCATGCG GCTGGCATCG TGATCGGCGA TCGTCCCCTG
AGCGAACTCG TACCGTTGTA CCGCGATCCG AAGTCGGACA TGCCGGTGAC CCAGTTCAAC
ATGAAGTGGG TGGAGCCGGC AGGGCTGGTG AAGTTCGACT TTCTCGGCCT GAAGACGCTG
ACCGTTCTTG ACGTTGCCGT GAAGCTGCTG AAGCAGCGCA ATGTCCATAT CGATCTCGCA
ACGCTGCCGC TCGACGATGC GGAAAGCTAC CAGATGCTGA CGCGGGGCGA CGTGGTCGGC
GTTTTCCAGG TTGAAAGTCA GGGCATGCGG CGGGCGCTGG TGGATATGCG CCCGGACCGG
TTCGAGGACA TCATTGCGCT GGTCGCGCTG TATCGACCGG GGCCGATGGC GAATATTCCG
ACCTACTGCG CGCGCAAGCA TGGCGAAGAG GAGCCGGAAT ATCTTCATCC CATGCTGGAG
CCGATCCTCA AGGAAACGTT TGGCGTCATC ATCTATCAGG AACAGGTGAT GCAGATCGCC
CAGGTCATGG CCGGCTATTC GCTCGGCGAC GCCGATCTGC TGCGGCGCGC GATGGGCAAG
AAGATCCGCG CGGAAATGGA AAAGCAGCAC GCGATTTTTG TTGCCGGCTC CGTGAAGAAC
GGGGTGCCCA AGGGGCAGGC GGAAACAATT TTCGAGTTGC TGGCGAAGTT TGCCGATTAC
GGATTCAATA AAAGCCATGC CGCGGCCTAT GCGCTCGTAT CCTACCAGAC GGCGTATATG
AAAGCGCATT ATCCCATCGA ATTTCTGGCG GCGTCGATGA CGCTCGATAT GAGCAACACC
GACAAGCTTT CGGAATTTCG CAGCGAGGCC CAGCGCCTTG AGATCAAGGT CGAAGCGCCC
TCGATCAACC GCTCGGGCGC GACCTTCGAG GTCAGCGGCG GCGTGATCTG TTACGCGCTG
GCGGCGCTGA AAGGCGTCGG CGCGCAGGCG GTCGAGCAGA TCGTCGAAGC CCGCAAGAAC
GGATTGTTCA CGTCGCTGGC CGATTTCGCC GCCAGGGTGC CGCCGCGCGC CGTCAACAAG
CGCGTGATCG AAAGCCTCGC GGCCGCCGGA GCGTTCGATG CGTTCGAACC CAATCGCGCC
CGTGTGTTCG CCGGCGCCGA GGCGATCCTT GCCGCGTGCC AGCGCAGTCA CGAGGCCGCG
ATGCTCGGTC AGAACGACAT GTTCGGCGGT ATGGCGGATG CGCCGGCCAT CATGCTGCCT
CAGGCGGAGC CGTGGTTGCC GTCCGATCGG CTGAAGCGCG AGTACGATGC GGTCGGGTTT
TTCCTGTCGG GGCATCCGCT CGACGACTAC GCAACCGCGC TGAAGCGGCT GCGCGTCCAG
TCCTGGGCCG AGTTTTCCCG CGCGGTAAAG ACAGGCGCGA CCGCAGGCAG GGTCGCCGCG
ACGGTCGTCT CGCGGATGGA GCGGCGCACC AAGACCGGCA ACAAGATGGG CATCATCGGC
CTGTCCGATC CGACCGGCCA TTTCGAGGCG GTGCTGTTTT CGGAAGGGCT GGCGCAATTT
CGCGAGGTGC TGGAGCCGGG GGCCGCGGTT TTGATGCAAC TCGGCGCGGA ACTGCAGGGC
GATGAGGTTC GCGCCCGCGT TCTGCACGCG GAGCCCTTGG ACGATGCCGC GGCCAAGACC
CAGAGGGGTT TGCGGATTTT CCTGCGCGAT ACCAGGCCGC TCGATTCGAT CGTAAGGCGA
CTTCAGACGC CCGAAAACGA TGGCCCGGCC GGGGCGGCCA AGGTTCCAGC GTCCAGGCAA
TCCGGAGACG GCGACGTCTC GCTGGTGATG TTGCTGGACC TCGAAACCGA GGTGGAAATA
AAGCTTCCCG GCCGTTTTCG GGTTTCGCCG CAGGTCGCAG GCGCCATCAA GGCGGTTTCG
GGGGTCGTGG ACGTCCAGGC GATCTGA
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| Protein sequence | MSQKLAAANA GFVHLHVHSA YSLLKGSIKI QKLAELAKAD HQPALALTDT DNMFGALEFS
DKVAGYGIQP IVGCELAVDF DDQDPNARSA LPFARIVLLA TREAGYRNLM RLNSRAFLES
ALHQTPHIKS GWLRDENEGL IALTGGPDGP VALAFNADHS ALAIARCDQL AGVFGDRLYV
ELQRHGLDKE RRVEGALIDL AYAKGLPLVA TNEPYFAASD DYEAHDALLC IAGGRLVAET
DRDQLTPDHR FKTRAEMAVL FADIPEALSS TIEIAERCAF RPLTRKPILP HFAVGAGANA
ADAKSDEVAE LRRQAEEGLA NRLAVHGLSQ GMTEDDYSAR LSFELDVITR MNYAGYFLIV
ADFIKHAKSE GIPVGPGRGS GAGSLVAYVL TITDLDPIRF GLLFERFLNP ERVSMPDFDI
DFCQERRGEV IDYVQKRYGR DQVAQIITFG TLQARGVLRD VGRVLQMPYG QVDKLTKLVP
QNPAAPITLA AAIASEPKLQ AFRDEDPVVA RAFDIAQRLE GLTRHASTHA AGIVIGDRPL
SELVPLYRDP KSDMPVTQFN MKWVEPAGLV KFDFLGLKTL TVLDVAVKLL KQRNVHIDLA
TLPLDDAESY QMLTRGDVVG VFQVESQGMR RALVDMRPDR FEDIIALVAL YRPGPMANIP
TYCARKHGEE EPEYLHPMLE PILKETFGVI IYQEQVMQIA QVMAGYSLGD ADLLRRAMGK
KIRAEMEKQH AIFVAGSVKN GVPKGQAETI FELLAKFADY GFNKSHAAAY ALVSYQTAYM
KAHYPIEFLA ASMTLDMSNT DKLSEFRSEA QRLEIKVEAP SINRSGATFE VSGGVICYAL
AALKGVGAQA VEQIVEARKN GLFTSLADFA ARVPPRAVNK RVIESLAAAG AFDAFEPNRA
RVFAGAEAIL AACQRSHEAA MLGQNDMFGG MADAPAIMLP QAEPWLPSDR LKREYDAVGF
FLSGHPLDDY ATALKRLRVQ SWAEFSRAVK TGATAGRVAA TVVSRMERRT KTGNKMGIIG
LSDPTGHFEA VLFSEGLAQF REVLEPGAAV LMQLGAELQG DEVRARVLHA EPLDDAAAKT
QRGLRIFLRD TRPLDSIVRR LQTPENDGPA GAAKVPASRQ SGDGDVSLVM LLDLETEVEI
KLPGRFRVSP QVAGAIKAVS GVVDVQAI
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