Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1618 |
Symbol | |
ID | 4033310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1816214 |
End bp | 1819090 |
Gene Length | 2877 bp |
Protein Length | 958 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970093 |
Product | glycine dehydrogenase |
Protein accession | YP_576897 |
Protein GI | 92117168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.89287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC GTGAAGAGCC CGCCACCACC TTCGCGCGCC GCCATATCGG CCCGTCGTCA CGCGATATCG CCGCGATGCT GGAAACCGTC GGCGCGAAGA GCCTCGCGGC ATTGATGAAC GAGGCGCTGC CGCCGTCGAT CCGGCAGGCG GCGCCGCTCG ATCTCGGCCA AGGCTTAAGC GAAGGCTTAA GCGAAACCGA AGCGCTGGCG CACATGCAGA GTCTCGCCGC GCAGAACCAG GCGTTCACCT CGCTGATCGG GCAAGGCTAT TCCGGCACGA TCCTGCCGGC GGTGATCCAG CGCAACATCC TGGAAAACCC GGCGTGGTAC ACAGCCTACA CGCCCTATCA GCCGGAAATC AGCCAGGGGC GGCTGGAAGC GCTGTTCAAT TTCCAGACCA TGATCTGCGA CCTCACCGGT CTCGATGTCG CCAACGCCTC GCTGCTCGAC GAAGCGACCG CGGTGGCCGA AGCGATGGCG CTCGCCGAGC GCGCATCATC GGTGAAAACA AAAGCCTTCT TCGTCGATCA CGAGGTGCAT CCGCAGACGC TGGCGGTGCT GCGCACCCGC GCCGAACCGC TGGGCTGGAC GCTCGTCACC GGCGATCCGC TGCGCGATCT CGACAAGGCG GACGTGTTCG GCGCGGTGCT GCAATATCCG GGCACATCCG GCGTGGTGCG CGACCTGCGC CCCGCGATCT CAACACTGAA GGCCAAGGGC GGTCTTGCGG TGGTCGCCGC CGACCTGCTG GCGCTGACGC TGCTGGCCTC CCCCGGCGTG CTCGGCGCCG ACATCGCAGT TGGATCGGCG CAACGCTTCG GCGTGCCGAT GGGCTATGGC GGCCCGCACG CGGCCTACAT GGCGGTGCGC GACACGCTGA AGCGGCTGCT GCCCGGCCGC ATCGTCGGCC TCTCCGTGGA CTCCCGCGGG GCACCGGCCT ATCGCCTCGC TTTGCAGACC CGCGAGCAAC ATATCCGCCG CGAGAAAGCA ACCTCCAACA TCTGCACCGC GCAGGTGCTG CTGGCGGTGA TCTCCTCGAT GTACGCAGTC TATCATGGCC CCGAAGGACT GGCGCAGATC GCGCGCACCG TGCATCGCCG CACCGCGACA TTGGCGGCGG GACTGACGAG GCTCGGCTTC GCGCCGCTCA ACGATGCAGC TTTCGATACG CTGACCGTGA GCGTCGGCGA CCGGCAAAAC GAGATTGCCG GGCGCGCGCT CAGCCAGGGC ATCAACCTGC GGATCAACGC CGACCATACG CTCGGCATCG CGCTCGACGA ACTCACCACG CCGGAGATCG TCGAAGCGGT GTGGCGCACA TTCGGCGCCG CGTTCTCTTA CGCCGACGTC GAAGCGCACG CCCCCGACCT GCTGCCTGCC GATCTCGGCC GCAGAACAGC CTATCTGACC CATCCGGTAT TTCACGCGCA CCGCTCGGAA ACCGAACTGC TGCGCTACAT GCGAAAGCTC AGCGACCGCG ACCTTGCACT CGACCGCGCG ATGATCCCGC TCGGCTCCTG CACGATGAAG CTCAACGCCA CCACCGAAAT GATTCCGCTG ACGTGGCCGG CATTCGCGGG CCTGCATCCG TTCGCGCCGT GCGAGCAGGC GGAGGGTTAT TACGCGCTGT TCGAAGAATT TGAACAATGG CTGATCGACA TCACCGGCTA CGATGCGATC TCGCTGCAGC CCAACTCCGG CGCACAGGGC GAATATGCCG GGCTGCTGGC GATCCGCGGC TATCACGCAG CGCGCGGCGA TAGTCACCGC ACGGTGTGCC TGATCCCCTC CTCGGCGCAC GGCACCAATC CGGCCTCCGC CAACATGGCC GGCATGGAGG TCGTGGTGGT GGCCTGCGAT GCGCGCGGCG ATGTCGACGT CGACGATCTC AGGGCCAAGG CGGCGCAGCA CGCCGACCGG CTCGCCGCGA TCATGATCAC CTATCCCTCG ACGCACGGCG TGTTCGAGGA GCGCATCCGC GAGATCTGCG ACATCGTGCA TAGCCACGGC GGACAGGTCT ATCTCGACGG CGCCAACATG AACGCGCAAG TCGGCCTGTC GCGGCCCGGC GATTACGGCG CCGACGTCAG CCATCTCAAC CTGCACAAGA CCTTTTGCAT CCCGCACGGC GGCGGCGGAC CGGGCATGGG CCCGATCGGC GTGAAAGCGC ACCTCGCATC CTTCCTTCCC GGCCACCCCG CGACCGACGG CGCCACGCCG CCCGCGGTCG GAGCGGTCTC GGCGGCGCCG TTCGGCTCGG CCTCGATCCT GACCATTTCC TACATCTACG TCCTGATGAT GGGCGGCGAA GGCCTGACGC GCGCCACCGA AGTCGCGATT CTCAACGCCA ACTATGTCGC ACAACGGCTC GATCCGCACT TTCCGGTGCT GTACCGCAAC GTGAAGGGCC GGGTCGCGCA TGAATGCATC ATCGATCCCC GCGCGCTGAA GGCCGAAACC GGCGTCACCG TGGACGATAT CGCCAAGCGG CTGATCGACT ACGGCTTCCA TGCCCCGACC ATGAGTTTTC CGGTACCGGG CACGTTGATG ATCGAGCCGA CCGAATCCGA ATCGAAGGCG GAACTGGATC GATTCTGCGA CGCCATGATC GCGATCCGGC GAGAAATCGC GGAGATCGAG GCCGGACGCT GGAGCGTCGA GGCATCGCCG CTGCGCCACG CGCCGCATAC GGTGCACGAC ATCGCCGACG ATACCTGGTC TCGGCCCTAC AGCCGGGCCC AGGGCTGCTT TCCGGCTGGC ACCTCGCGGT TGGACAAATA CTGGTGCCCG GTCGGACGAG TCGACAATGC CTACGGCGAT CGCAACCTCG TCTGTTCCTG CCCGCCGATG GAAGACTACG CGCAGGCGGC GGAGTAG
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Protein sequence | MTAREEPATT FARRHIGPSS RDIAAMLETV GAKSLAALMN EALPPSIRQA APLDLGQGLS EGLSETEALA HMQSLAAQNQ AFTSLIGQGY SGTILPAVIQ RNILENPAWY TAYTPYQPEI SQGRLEALFN FQTMICDLTG LDVANASLLD EATAVAEAMA LAERASSVKT KAFFVDHEVH PQTLAVLRTR AEPLGWTLVT GDPLRDLDKA DVFGAVLQYP GTSGVVRDLR PAISTLKAKG GLAVVAADLL ALTLLASPGV LGADIAVGSA QRFGVPMGYG GPHAAYMAVR DTLKRLLPGR IVGLSVDSRG APAYRLALQT REQHIRREKA TSNICTAQVL LAVISSMYAV YHGPEGLAQI ARTVHRRTAT LAAGLTRLGF APLNDAAFDT LTVSVGDRQN EIAGRALSQG INLRINADHT LGIALDELTT PEIVEAVWRT FGAAFSYADV EAHAPDLLPA DLGRRTAYLT HPVFHAHRSE TELLRYMRKL SDRDLALDRA MIPLGSCTMK LNATTEMIPL TWPAFAGLHP FAPCEQAEGY YALFEEFEQW LIDITGYDAI SLQPNSGAQG EYAGLLAIRG YHAARGDSHR TVCLIPSSAH GTNPASANMA GMEVVVVACD ARGDVDVDDL RAKAAQHADR LAAIMITYPS THGVFEERIR EICDIVHSHG GQVYLDGANM NAQVGLSRPG DYGADVSHLN LHKTFCIPHG GGGPGMGPIG VKAHLASFLP GHPATDGATP PAVGAVSAAP FGSASILTIS YIYVLMMGGE GLTRATEVAI LNANYVAQRL DPHFPVLYRN VKGRVAHECI IDPRALKAET GVTVDDIAKR LIDYGFHAPT MSFPVPGTLM IEPTESESKA ELDRFCDAMI AIRREIAEIE AGRWSVEASP LRHAPHTVHD IADDTWSRPY SRAQGCFPAG TSRLDKYWCP VGRVDNAYGD RNLVCSCPPM EDYAQAAE
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