Gene Nham_1588 details

Gene Information

• Locus tag: Nham_1588
• ID: 4033065
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1791322
• End bp: 1791909
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637970063
• Product: MerR family transcriptional regulator
• Protein accession: YP_576869
• Protein GI: 92117140
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACAAAG CACCGGATGC CTTCCGGACC ATTAGCGAGG TCGCTGCCGA TCTCGATGTT 
CCCCAGCATG TCCTGCGGTT CTGGGAAACC CGGTTTGCGC AGATCAAGCC GATGAAACGA 
AGCGGCGGGC GACGCTACTA TCGCCCGGAC GACGTCGATT TGCTGCGCGG CATCCGCCAT 
CTGCTTTACA GCGAAGGTTA TACGATCCGC GGCGTGCAAC GGATTTTGAA AGAGCACGGC 
ATCAAATCGG TGCAGGGCCT GACTGAGGGG TCGTCCGCCG CGGCCTTCGG CGCCATCGAG 
GACGACATCC GTAATACCCT CGGCGCGGTC GATGACGACG ATGCACCCGG CTATGAGGCC 
GAGGACGCCG AGGACGATGA GGATGCCGGC GACAGCTTGC CCCGCGCGCG GGAGCCGGGC 
GAGCATAAAC CGCTGCGGCA CGATCTCGAT GACGTGCTGT GGTCCGGTCC CGACAGCGCG 
GCGATCCCTG GCGTGGGCAA CGCTGTCGAC CTTGCGAAGC TCAAGGATGT ATTGGCCGAG 
CTCGTCGCCT GTAGGCAACT GCTGGACAGC GCGCTCGCGG ACGGCTGA 

 

Protein sequence

MDKAPDAFRT ISEVAADLDV PQHVLRFWET RFAQIKPMKR SGGRRYYRPD DVDLLRGIRH 
LLYSEGYTIR GVQRILKEHG IKSVQGLTEG SSAAAFGAIE DDIRNTLGAV DDDDAPGYEA 
EDAEDDEDAG DSLPRAREPG EHKPLRHDLD DVLWSGPDSA AIPGVGNAVD LAKLKDVLAE 
LVACRQLLDS ALADG