Gene Nham_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1576 
Symbol 
ID4033053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1780053 
End bp1780835 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID637970051 
ProductATP12 ATPase 
Protein accessionYP_576857 
Protein GI92117128 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5387] Chaperone required for the assembly of the mitochondrial F1-ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.190684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAAC TGTTTGAGGA TCCCGGCCCG TCGCCGCTGG ATCCGGAAGA AGCGGTGCGA 
AGATCCGGGC GAACCGGGCA GCCGAAACGT TTCTATACCT CCGCGGGCGT GAGGGAGGTG
CCTGAAGGGT TCGCCGTCCT GCTCGACGAC AAGCCTGTGC GCACGCCGTC GCGCAACCTG
TTGGCGGCGC CGGCCCGAGA GATCGCCGCA AGCATCGCCG CTGAATGGCA GGCGCAGCAG
GACGTCATCA ACCCCATGAC TATGCCGATG ACGCGGCTCG CCAACAGCGT CATCGATGGC
GTGGCCGGTC GCGTCGATGC CGTGGTCGCG GATATTGTCA AATATTTTGG GTCGGACCTT
TTATTTTACC GCGCCGGTCA TCCTGATGCG CTGGTAACAC GCGAAGCCGC GCATTGGGAT
CCCGTGCTGT TCTGGGCGGC CGAAACGCTG GGAGCGCATT TCATCCTGAC TGAGGGCGTC
GTCCATGTCC GCCAGCCGGA TCAGGCGATC GCCGTCGCCC GCGCGGCGCT GCCGTCCGAT
CCCTGGGCGG TTGGAGCCCT GCATGTCGTC ACGACATTGA CCGGTTCGGC GTTGCTCGCG
CTCGCCTTGA TGCGCGAACG GCTGAATGCG GACGAGGTCT GGGCCGCCGC CCATGTCGAT
GAGGATTGGA ACGGCGAGCA GTGGGGCGTC GATGAGGAAG TAACCGTCCG GCGGGCCGCC
CGTCTGGCCG ATTTCAGAGC GGCAGCGGCC GTCCTGGCAG CGCAGGCTCC TGCATTCGGT
TAA
 
Protein sequence
MRELFEDPGP SPLDPEEAVR RSGRTGQPKR FYTSAGVREV PEGFAVLLDD KPVRTPSRNL 
LAAPAREIAA SIAAEWQAQQ DVINPMTMPM TRLANSVIDG VAGRVDAVVA DIVKYFGSDL
LFYRAGHPDA LVTREAAHWD PVLFWAAETL GAHFILTEGV VHVRQPDQAI AVARAALPSD
PWAVGALHVV TTLTGSALLA LALMRERLNA DEVWAAAHVD EDWNGEQWGV DEEVTVRRAA
RLADFRAAAA VLAAQAPAFG