Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1562 |
Symbol | rpsE |
ID | 4033136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1767062 |
End bp | 1767634 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637970038 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_576844 |
Protein GI | 92117115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.205213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGGTG AACGCGAACG CGGTGGCGGC CACAGGGGTG GTCGGGAAGA GCGCGATAGC GAATTCGTCG ACAAGCTCGT CCACATCAAT CGGGTGGCGA AGGTCGTCAA GGGCGGCAAG CGCTTCGGCT TTGCGGCGCT GGTCGTGATC GGCGATCAGA AGGGCCGGGT CGGGTTCGGT CACGGCAAGG CGCGCGAAGT TCCGGAAGCG ATCCGCAAGG CGACGGAGTC GGCCAAGCGC AATCTGACGC GCGTGGCGCT GCGCGAGGGC CGGACGCTGC ATCACGACAT CGCGGGCCGT CACGGCGCCG GCCGGGTTTA CCTGCGCGCC GCGCCGGCCG GCACCGGCAT CATCGCCGGC GGCCCGATGC GCGCCGTGTT CGAGACGCTC GGCATCCAGG ACGTGGTGGC GAAGTCGGTC GGCTCGTCCA ATCCCTACAA CATGATTCGC GCGACCTTCG ACGCGCTGAA ACATCAGGAT TCACCGCGTT CGGTTTCCGC TCGCCGCAAT ATCAAGGTAT CCACGCTGCA ATCGCGCCGT GTCGGCGGCG ACGCGGAAGC GGTTGCCGAA TAA
|
Protein sequence | MAGERERGGG HRGGREERDS EFVDKLVHIN RVAKVVKGGK RFGFAALVVI GDQKGRVGFG HGKAREVPEA IRKATESAKR NLTRVALREG RTLHHDIAGR HGAGRVYLRA APAGTGIIAG GPMRAVFETL GIQDVVAKSV GSSNPYNMIR ATFDALKHQD SPRSVSARRN IKVSTLQSRR VGGDAEAVAE
|
| |