Gene Nham_1557 details

Gene Information

• Locus tag: Nham_1557
• Symbol: rplE
• ID: 4033131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1764639
• End bp: 1765196
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637970033
• Product: 50S ribosomal protein L5
• Protein accession: YP_576839
• Protein GI: 92117110
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAGA CTGCTTATGT GCCGCGCCTG CGCGTGGAGT ACGACAAGAG CATTCGCACC 
AAGCTGACCG AGCAGTTCGG CTACGTCAAT GTCATGGAGG TGCCGCGCCT CGACAAGGTG 
GTTCTCAACA TGGGAATCGG CGAAGCCGTG AACGACCGCA AAAAGGCCGA GACGGCGGCT 
GGGGATCTGT CGCTGATTGC TGGCCAGAAG GCGCTCGTGA CCTATTCGCG TGTTGCGATT 
TCGACCTTCA AGCTGCGCGA AAACCAGCCG ATCGGCTGCA AGGTGACGCT GCGCAAGGCG 
AAAATGTACG AGTTTATAGA TCGCCTGATA AACGTTGCGC TGCCGCGCGT GCGCGACTTC 
CGCGGTCTCA ATCCGAAGAG CTTCGACGGT GGCGGCAATT ACTCGCTCGG CATCAAGGAA 
CACATCATTT TCCCCGAAAT CGACTTCGAC AAGGCCGGGG AGAGCTGGGG CATGGACGTC 
ACGGTCTGCA CGACCGCGCA GACCGACGAC GAAGCCCGGG CGCTGCTGAC TGCATTCAAT 
TTTCCGTTCC GGCAGTGA 

 

Protein sequence

MAETAYVPRL RVEYDKSIRT KLTEQFGYVN VMEVPRLDKV VLNMGIGEAV NDRKKAETAA 
GDLSLIAGQK ALVTYSRVAI STFKLRENQP IGCKVTLRKA KMYEFIDRLI NVALPRVRDF 
RGLNPKSFDG GGNYSLGIKE HIIFPEIDFD KAGESWGMDV TVCTTAQTDD EARALLTAFN 
FPFRQ