| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1479 |
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| Symbol | |
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| ID | 4032880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1679936 |
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| End bp | 1680631 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969953 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_576761 |
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| Protein GI | 92117032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.781791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTC CCCCTCCCCT AGTCGTGTTC GACCTCGACG GGACGCTAGT CGATACCGCG
CCCGATCTCG CCGCCGCGCT CAACTTCGTT TTGGACCGCG AAGGCCTGCG CACGGTGTCG
TTGCCAACCG CCCGCTCGAT GATCGGCGCG GGGGTTCGCC GCATGATCGA ACGCGGCCTT
GAACATGAGG ATCGCGCCGC GACGCCGGAT GACGTCACGC GGATGATGGG CGACTTCGTC
GACTACTATA CGGCGCATAT CGCCGACGCA TCGCGTCCGT TTGAGGGACT CATCGAGGCG
CTCGACGACC TGTCGGCGCG AGGATACCGT TTCGCGGTCT GCACCAACAA ACTGGAATCG
CTTGCCAAGC TGCTGCTTGA CCAGTTGGAA TTGAGTCCGC GGTTTTCTGC GATCTGCGGA
GGCGACACCT TTGGCGTATC CAAACCGGAT CCGGCGATCC TACAGCAAAC GATCGCGCAC
GCGGGCGGAA GCATGAAGGC CGCCGTCATG GTGGGCGATG CAGGCCCCGA CATAGGGGTG
GCGCGCCGAG CCGGGATTCC GGTCATCGGG GTCACGTTCG GCTATACCGA GGTCCCGATC
GCGGAACTCA AACCCGATCG CCTCATCGGC CACATGAGGG AGTTGCCGGA CGCCGTCGCC
GCGCTGCAGG CCGCGGCGCT GAACGTAACC GGCTGA
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| Protein sequence | MSSPPPLVVF DLDGTLVDTA PDLAAALNFV LDREGLRTVS LPTARSMIGA GVRRMIERGL
EHEDRAATPD DVTRMMGDFV DYYTAHIADA SRPFEGLIEA LDDLSARGYR FAVCTNKLES
LAKLLLDQLE LSPRFSAICG GDTFGVSKPD PAILQQTIAH AGGSMKAAVM VGDAGPDIGV
ARRAGIPVIG VTFGYTEVPI AELKPDRLIG HMRELPDAVA ALQAAALNVT G
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