| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1466 |
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| Symbol | |
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| ID | 4032867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1663644 |
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| End bp | 1665617 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637969940 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_576748 |
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| Protein GI | 92117019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTAT CGACGCAAAA AAACATGCCA TTACGGGCGG GCGAACGAGG TGCGGCGGCG
GGCAGCTTCC ACATTGAGGA CGTATATCCC TGCGTCGATG CCGGACGATT TCCGGTCAAG
CGGCTCGCAG GCGATACCAT CGAGGTCTGG GCAGATATAT TCCGCAGCGG TCATGACATC
ATTGCCGCGC AATTGATCTG GCGTCGCGAG GAGGATCGCG ACTGGCACAA GTTGCCGATG
ACGCTGCACG ACAACGATCG CTGGTTCGGC AGCTTCGCGC CCGGCGAACC CGGTCGCTAT
GTCTATGCCA TCGAAGCCTG GACCGATGAA TTCGCCACAT GGAAGCATGG CTTCGAACTG
AAGCAGAAAG CCGGTCAGGA CGTCACTCTC GATGCGCTGG AGGGCGCCGC GCTACTGACG
CGCGCGCAGT ATGGCGGCAA GGAAGCCACG ACGATCATCG TTCGTCAGTG CGAGGACTAC
CTGAAAGGCG GCGATCCCGC GAGCCTGCTT GTGCCGGAAC TGGCCAGCGC CATGACCGAA
AGCCGGGAAC GCGGCGATCT CACGCGGTCG CAGCTTTACC CGCTGACGAT CGACCGCAGC
CTCGCCGCGG CGGGAGCATG GTACGAAATG GTGCCCCGGA GCCAGGGCGC GGTCGCCGGC
CAGCACGGCA CGTTTCGTGA CTGCATCGCC CGCCTCCCCG ATATCGCCGC CATGGGATTC
GATGTTCTTT ATTTTACGCC GATTCATCCG ATCGGCAGGA TCAATCGCAA GGGGCGCAAT
AATGCGTTGA CCGCCGCCGA AGGCGACCCC GGCAGTCTCT ACGCCATCGG CGCCGAGGAA
GGCGGGCACG ATGCGATCCA TCCGGACCTC GGCACCTTCG ACGACTTCCG CGACCTGATC
GCCGCCTGCA AGACCCACGG CATGGAGATC GCCCTCGACA TCGCGGTGCA GTGTTCGCCC
GATCATCCCT GGCTGACGCA GCATCCCGAC TGGTTCAAGC GGCGCCCCGA CGGCTCGATG
CGCTATGCGG AAAACCCTCC GAAGAAATAC GAGGACATCG TCAATCCCGA TTTCGGTTGC
GACGATGCAG GCTCGCTATG GAACGCGCTG CGCGACGTGA TCCTGTTCTG GGTCAATCAG
GGCGTGCGCA TCTTTCGTAT CGACAATCCG CACACCAAGC CGTTCAATTT CTGGGAATGG
CTGATCCGCG AGGTCCAGAC GAAAGACCCC GGCGTCATCT TCCTCGCCGA GGCCTTCACC
CGGCCGAAAG TCATGAAGGG CCTGGCGAAG CTCGGTTTCA CGCAGTCCTA TACGTACTTC
ACCTGGCGCA CCCGGAAATG GGAGATCGAG TCCTATCTCA ACGAGCTGAC GGGATATCCC
GAGCGCGACT ACTATCGGCC GAATTTTTTC GTCAACACGC CGGACATCCT GCCCTACCAC
CTGCAAAGCG GCGAATCCTG GATGTTCAAG TCGCGCGTGG CGCTGGCGGC GACGCTGTCG
AGTACTTACG GAATCTACAA CGGCTTCGAG CTGCTGGAGC ACGACGCTAT TCCAGGACGC
GAGGAATACC TCAACTCCGA AAAGTACGAG ATCAAGGTTC GCGACTGGAA TGCACCCGGC
AACATCAGGG CGTACATCGC CGCGCTCAAT CAGGCGCGTC GTGCCAATCC GGCGCTTTTG
CAAACCCGCA ATCTGAGGTT TCTCCCGGTC GACAACGACC AGATCGTCGC CTTCACCAAG
CAAACCACGG ACGCGGGCAA CACGATCGTC GGCGCCATCG CGCTGTCGCG CGACGCCTGT
GAATTCTGGC TGCCGCTGGA TTCAATCCAG ATCCGCGCCG CCAACGACTC GATGCCTCCG
GTCGCGCTGG AAAACCTCAT GACCGGCGAG CGTCACGCCA TCGAATGGGG GGGCGTGCGC
TTGAGGATCG ATCCGCTCCG CGATCCCGCG CTTTTGTTTT GCTGTCTGGC GTGA
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| Protein sequence | MSVSTQKNMP LRAGERGAAA GSFHIEDVYP CVDAGRFPVK RLAGDTIEVW ADIFRSGHDI
IAAQLIWRRE EDRDWHKLPM TLHDNDRWFG SFAPGEPGRY VYAIEAWTDE FATWKHGFEL
KQKAGQDVTL DALEGAALLT RAQYGGKEAT TIIVRQCEDY LKGGDPASLL VPELASAMTE
SRERGDLTRS QLYPLTIDRS LAAAGAWYEM VPRSQGAVAG QHGTFRDCIA RLPDIAAMGF
DVLYFTPIHP IGRINRKGRN NALTAAEGDP GSLYAIGAEE GGHDAIHPDL GTFDDFRDLI
AACKTHGMEI ALDIAVQCSP DHPWLTQHPD WFKRRPDGSM RYAENPPKKY EDIVNPDFGC
DDAGSLWNAL RDVILFWVNQ GVRIFRIDNP HTKPFNFWEW LIREVQTKDP GVIFLAEAFT
RPKVMKGLAK LGFTQSYTYF TWRTRKWEIE SYLNELTGYP ERDYYRPNFF VNTPDILPYH
LQSGESWMFK SRVALAATLS STYGIYNGFE LLEHDAIPGR EEYLNSEKYE IKVRDWNAPG
NIRAYIAALN QARRANPALL QTRNLRFLPV DNDQIVAFTK QTTDAGNTIV GAIALSRDAC
EFWLPLDSIQ IRAANDSMPP VALENLMTGE RHAIEWGGVR LRIDPLRDPA LLFCCLA
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