| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1464 |
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| Symbol | |
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| ID | 4032865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1658203 |
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| End bp | 1660353 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637969938 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_576746 |
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| Protein GI | 92117017 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC TGTCCTCCGA AGCCCGCGCC ATCGTCGAAG GGCGGCATTC AGACCCCTTT
CACTATCTCG GCCGTCATCG CGAGAATGAC CGTCAGGTGG TTCGCGCCTA TCTGCCCGAG
GCATCCGATG TGCGCGTCGT CGATGAGCAC GGTGGAGAGA CGACGCTGAC ACGCATTCAT
GACGCCGGGC TTTTCCTCGG CGACCTGCCG AACGGCGCCA AGCGCTACCG CCTTCGCGCT
CGCTTTGGCG CCGACACGGT CGAGCTTGAG GACCCTTACC GCTTTCCGCC GATCCTCAGC
GATTTCGATC TCTATCTGCT CGGTGAAGGC ACGGATCAAC GGCTCTATGA CAAGCTCGGC
GCTCACCCGA TAACGATGGA TGGCGTGGGC GGCACCGGCT TCGTCGTGCT TGCGCCCAAC
GCACGGGCCG TCGCTGTCGT CGGCGATTTC AATTGCTGGG ATCGCCGCCG TCATCCGATG
CGCGTGCGAG GCAACGGATA TTGGGAATTG TTCATTCCCG GCGCGCAAAC GGGCGACCGC
TACAAATTCG CGATCACAGA TAAGAGCGGT AGTTTGTTGC CGCTGAAGTC CGATCCGATG
GCGTTCGCGG CGGAAGTTCG ACCGAACACG GCGTCGATCG TAGTCGATGA AGCAGCGCTG
CCGTGCCCCA CACCAGCGGC CGCCACGATC AATGCACGCC GTGCGCCGAT CTCCATCTAC
GAGGTCCATC TCGGATCGTG GCGGCGCGGC GACGACAACC GCTGGCTGTC CTATCGCGAA
CTCGCGGACA CCCTGCCGCG CTATGCCAGC AGCCTTGGCT TCACCCATAT CGAGCTGATG
CCGGTGAACG AGCATCCGTT CGACGGTTCG TGGGGCTATC AGCCCACCGG CCTTTACGCA
CCGACGAGCC GCTTTGGTTC GCCCGACGAT TTCGCGCATC TGGTCGATGC CTGCCATCGC
GAAGGACTCG GCGTCCTGCT CGATTGGGTG CCCGGCCACT TTCCCGACGA TCCTCACGGA
CTCGGCCATT TCGACGGCAC CGCGTTTTAC GAACACGCCA ACCCGTTGCA GGGCCGCCAC
CTTGACTGGG ACACCCTGAT CTACAACTAC GGCCGCACCG AAGTGGTCAA TTTCCTCGTC
GCCAACGCGC TGTTCTGGCT CGATCGCTAC GGCCTGGACG GCCTTCGCGT CGATGCTGTC
GCGTCCATGC TCTATCTCGA TTACAGCCGT GCCGAAGGCG GCTGGATTCC CAACAAACAC
GGCGGCCGGG AAAATCTTGA AGCCATCGCA TTTCTGCGCC GATTCAACAG GGAGGTGTTC
GCCAAATTCC CGCACGCCAC CACGATAGCG GAGGAATCGA CGGCATGGCC GCAGGTCTCG
CGTCCGATTG AGTTCGGCGG CCTCGGATTC GGCTACAAAT GGAATATGGG CTGGATGCAC
GATACGCTGG ACTATATCGG CAAGGATCCG ATCTACCGCA AGCATCACCA CGGCCAGATC
CTGTTCGGGC TGCACTATGC ATTCTCGGAA AATTTCATCC TGCCGCTATC GCATGACGAG
GTGGTGCACG AGAAGCGCTC GATCCTCGGC CGTATGCCGG GCGATGACTG GCAGCGGTTC
GCAAACCTGC GCGCCTACTA CGCGTTCATG TTCGGCCATC CCGGCAAGAA GCTGATGTTC
ATGGGTGCGG AGTTCGGCCA GGAGCGCGAA TGGAACCACG ACCACGCACT TGACTGGCAT
CTTCTCGATC AGGCACGACA CCAGGGAGTC CAGGCCGTCG TTCGCGATCT CAACGCGCTC
TATCGTGACG TTCCGGCACT GCACGAACTG GATTGCGATC CGGCCGGATT CGAATGGATC
ATGGCCAACG ATGCCGATCG CAGCGTCTTC GCCTGGATGC GCAAAGGCGA AAGCGGACGG
GCGCGCTGTC TGGTGATCGC CAATTTCACG CCGACCGTCC ATCGCAGCTA CCGCGTGCGC
GTACCCTTCG CCGGCAAGTG GCGCGAGGCG CTCAATACCG ACTCCGCGCA TTATGGCGGA
AGCAATGTCG GGAACAACGG AGTGGTCGAG ACGCTGGACG GTGTCATCCC CGAGCTTAGT
CTGACGCTTC CGCCGCTCGC GGTGATCTTT CTGGTACCGG AACGCGCATG A
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| Protein sequence | MIELSSEARA IVEGRHSDPF HYLGRHREND RQVVRAYLPE ASDVRVVDEH GGETTLTRIH
DAGLFLGDLP NGAKRYRLRA RFGADTVELE DPYRFPPILS DFDLYLLGEG TDQRLYDKLG
AHPITMDGVG GTGFVVLAPN ARAVAVVGDF NCWDRRRHPM RVRGNGYWEL FIPGAQTGDR
YKFAITDKSG SLLPLKSDPM AFAAEVRPNT ASIVVDEAAL PCPTPAAATI NARRAPISIY
EVHLGSWRRG DDNRWLSYRE LADTLPRYAS SLGFTHIELM PVNEHPFDGS WGYQPTGLYA
PTSRFGSPDD FAHLVDACHR EGLGVLLDWV PGHFPDDPHG LGHFDGTAFY EHANPLQGRH
LDWDTLIYNY GRTEVVNFLV ANALFWLDRY GLDGLRVDAV ASMLYLDYSR AEGGWIPNKH
GGRENLEAIA FLRRFNREVF AKFPHATTIA EESTAWPQVS RPIEFGGLGF GYKWNMGWMH
DTLDYIGKDP IYRKHHHGQI LFGLHYAFSE NFILPLSHDE VVHEKRSILG RMPGDDWQRF
ANLRAYYAFM FGHPGKKLMF MGAEFGQERE WNHDHALDWH LLDQARHQGV QAVVRDLNAL
YRDVPALHEL DCDPAGFEWI MANDADRSVF AWMRKGESGR ARCLVIANFT PTVHRSYRVR
VPFAGKWREA LNTDSAHYGG SNVGNNGVVE TLDGVIPELS LTLPPLAVIF LVPERA
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