Gene Nham_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1434 
Symbol 
ID4033294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1616375 
End bp1617772 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content67% 
IMG OID637969908 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_576716 
Protein GI92116987 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCTA GGCGGTTTCG GGGCGGCCGC TCGAACTCGC TCGCAACGCG GCTGTTTCTG 
TCCGCGACCG CCTGGGTGGT GGTTATTCTG CTCATCACCG GCGTGGTGCT GTCGTCGGTC
TATCGCTCGG CGTCCGAGCG CGCCTTCGAC CGCCGCCTTA ATCTCTATCT CCGCACCCTG
ATCGCCGAAG TGGCGACGCC GGACGAGCCG CTCGATCGCC AGTTCCAGTC GCTCGGCGAG
CCGCTGTTCG ATCTGCCGCT GTCGGGTTGG TACTGGGAGA TCGTCCGCAC CGATCCGGAG
AAGAAAGAGA TTCGCGCGTC CCGCTCGCTG TGGGACAAGA AGCTGCCGAA GCTGGAGGAT
CAGGGCATCG AGCTCTCCTC GTCGGGGGTC CGTGTCGGCT ATGTCGACGG GCCCGAAGGG
CAGACCCTGC GCATGGTGGA GCGGCCGGTC GATCTCGGCA CCGACGGCAA GTTCCGCGTC
ACCGTGGCCG GAGACGCCAC CGAGATTTTC GATGAAACGC GGACCTTCGA CTATTACCTT
GGCGGCACGT TTGCCGCGCT CACGATCGTG CTGGTGCTGA CCACGATCTT TCAGGTGCGA
TTCGGTCTCG CTCCGCTGAA ACGCATTTCA GACGCCATCG CCGACATCCG GTCCGGCCGC
GCCGAACGGC TGGAGGGCGA GTTTCCGGTC GAGATCGCGC CGCTCGCCCG CGAGACCAAT
GCGCTGATCG ACGCCAACCG CGAGATCGTC GAGCGCGCCC GCACCCATGT CGGCAACCTC
GCGCACGCGG TCAAGACGCC GCTCTCGGTC ATCATCAACG AAGCCAACGC GCGCGAGCGC
GATCCCTTCG CCGCGAAGGT GCTCGAACAG GCCGAGGTGA TGCGCAATCA GGTGGTCCAT
CATCTGGAGC GCGCCCGCAT CGCCGCGCGG CTCACCGTGG TTGCAACGGT GACCGATGTC
GCGCCCGTCA TCGAGGCGCT GCGTCGGACC ATGGAGAAGA TTCACCGCGA CCGCGCCATC
GCCATCGCTG TCGATGCCAG CACTGCTGCG AAATTTCGCG GCGAACGCCA GGATCTCGAG
GAAATGGCCG GTAACCTCGT CGACAACGCC TGCAAGTGGG CGCGGTCGCG GGTGCTCATC
AAGGTATCCG TGCCTCCGGT TGCTGGAGCC GGGCCGGCGA TGCTGCACAT CGTCGTCGAC
GACGACGGCA GCGGACTGTC GGACGCCGAG CGGATGCAGG CCTCGCAGCG CGGCCGCCGC
CTCGACGAGA CCAAGCCGGG ATCGGGACTG GGGCTGTCGA TCGTCACCGA TCTCGCCGCC
CTTTATGACG GCAGCCTGAC GCTCGGCTCG GCGCCGATCG GCGGCCTGCG GGCCGAACTG
GTGCTGCCGG CGGCATGA
 
Protein sequence
MRARRFRGGR SNSLATRLFL SATAWVVVIL LITGVVLSSV YRSASERAFD RRLNLYLRTL 
IAEVATPDEP LDRQFQSLGE PLFDLPLSGW YWEIVRTDPE KKEIRASRSL WDKKLPKLED
QGIELSSSGV RVGYVDGPEG QTLRMVERPV DLGTDGKFRV TVAGDATEIF DETRTFDYYL
GGTFAALTIV LVLTTIFQVR FGLAPLKRIS DAIADIRSGR AERLEGEFPV EIAPLARETN
ALIDANREIV ERARTHVGNL AHAVKTPLSV IINEANARER DPFAAKVLEQ AEVMRNQVVH
HLERARIAAR LTVVATVTDV APVIEALRRT MEKIHRDRAI AIAVDASTAA KFRGERQDLE
EMAGNLVDNA CKWARSRVLI KVSVPPVAGA GPAMLHIVVD DDGSGLSDAE RMQASQRGRR
LDETKPGSGL GLSIVTDLAA LYDGSLTLGS APIGGLRAEL VLPAA