Gene Nham_1422 details

Gene Information

• Locus tag: Nham_1422
• ID: 4033282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1603835
• End bp: 1604419
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637969896
• Product: gene transfer agent (GTA) like protein
• Protein accession: YP_576704
• Protein GI: 92116975
• COG category: [S] Function unknown
• COG ID: [COG5281] Phage-related minor tail protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGACG ACACGAGCCT GCAGGACGCA TCGAGCACGC TCGACAGTAT CACCGCAAAA 
ACTCAGGCGC TGACGATCAG CGCGGGCGGC TTTGCGCGGG CGATGACGCA GGCGTTTTCC 
TCGTCGATCA ACGGCGGCAA GCAATTCGAC GACGTGCTGA AAACGCTGGC GCTGCGGGTC 
TCGAGCCTCG CGGTGACCGC CGCGTTCAAG CCGCTGACGG CGAGCCTGAC CAGCGGCATC 
TCCAGCCTGT TCTCGGGTCT CACCGGAAGC GCGGGCGCGG CCGCGGGCGT GCAGGCCAAC 
GCGCTCGGCG CCATCAAGCC GTTCGCATCG GGCGGCGTGA TCGGCACGCC CAGCTATTTT 
CCGATGATGG ACGGCGGCGT CGGCCTCGCC GGCGAGGCAG GTCCGGAGGC GATCATGCCG 
CTGGTGCGCG GTGCCGACGG CCGGCTCGGC GTCTCCGGCA ATGGCGGCGG CAACAGCATC 
ACGGTGCAGA TCGCGACCCC CGATCTCGAC AGTTTCCGTC GCTCGGAGAG CTACGTCACC 
GGTCAGATCG CGCGCGCGGT GGCGCGGGGG CAGCGGAGTC TCTAG 

 

Protein sequence

MTDDTSLQDA SSTLDSITAK TQALTISAGG FARAMTQAFS SSINGGKQFD DVLKTLALRV 
SSLAVTAAFK PLTASLTSGI SSLFSGLTGS AGAAAGVQAN ALGAIKPFAS GGVIGTPSYF 
PMMDGGVGLA GEAGPEAIMP LVRGADGRLG VSGNGGGNSI TVQIATPDLD SFRRSESYVT 
GQIARAVARG QRSL