| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1410 |
|---|
| Symbol | |
|---|
| ID | 4032328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1596648 |
|---|
| End bp | 1597823 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637969884 |
|---|
| Product | Phage portal protein, HK97 |
|---|
| Protein accession | YP_576692 |
|---|
| Protein GI | 92116963 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4695] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGC GCCTGAAAAA TCTTTTCACC CCACCCGAGA CCAAAGCCAG CCGCACCGCA
AAGCTGCTTG CGTTCGAGAG CGGCCGCCGC GCGCGGTGGA CGCCGCGCGA CTATGCGGCG
CTGGCGCGCG AGGGCTATCT TAATAACGCC ATCGTGCATC GCGCGGTCCG GTTGATCGCG
GAGAACGTGG CGTCGTGCAG CTACCTCGTG TTCGAGGGGG CGCAGGAGCA CGAGGCGCAT
CCGCTCTCGC TCCTGCTGTC GCGGCCGAAC GCGCGGCAGG ACGGCGGTGC ATTCCTCGAG
ATGCTGGTGT CGCATCTGCT GTTGGCCGGC AACGCTTATG TCGAGGTGGT CGCGCTCGAC
GGCGCGGTGC GCGAGCTTTA CGCGCTACGG CCCGATCGCA TGAAGGTGGT GCCCGGTCCC
GACGGCTGGG CGGAGGCATA TGAATATAGC GTCGGCGGGC GCAGCGTGCG CTTCGATCAG
GCGTCATCCG CCGTGCCGCC GATCCTGCAC CTGACATTCT TTCATCCGCT CGACGATCAC
TATGGTCTCG CGCCGATCGA ACCGGCGGCG GTCGCCATCG ACACCCATAA CGCCGGATCG
ACGTGGAACA AGGCGTTGCT TGATAACGCG GCGCGGCCCT CGGGCGCGCT GGTCTATTCC
GGGCCGGAAG GAGCGGTGTT GTCGGATTCG CAGTTCGACC GGCTCAAGCG CGAAATGACC
GATACCTATC AGGGCGCGGT GAACGCGGGC CGGCCGCTGC TGCTCGAAGG CGGGCTCGAC
TGGAAGGCGA TGTCGCTGAC GCCGAAGGAC ATGGATTTCC TCGAGGCCAA GCACACCGCC
GCGCGCGAGA TCGCGCTCGC CTTCGGCGTG CCGCCGATGG TGCTCGGTAT TCCCGGCGAC
AACACCTATG CGAATTTCCA GGAGGCCAAC CGCTGCTTCT TCCGCCAGAC CGTGCTGCCG
TTGGCGTCGC GGATCGGCAA TTCGTTCGCG CAGTGGCTGT CGCCTCAGTT CGGCGACGCC
ATCCGCATCG TCGTGGATCC CGACAGGATC GACGCGCTCG CCACCGACCG CGCCGCGCTG
TGGCAGCGCG TCAGCAACGC GGCGTATCTC ACGCTCAACG AAAAGCGCGA GGCGGTCGGC
TACGCGCCGA TCGAGGGCGG CGACCGGCTG GAGTGA
|
|---|
| Protein sequence | MRLRLKNLFT PPETKASRTA KLLAFESGRR ARWTPRDYAA LAREGYLNNA IVHRAVRLIA
ENVASCSYLV FEGAQEHEAH PLSLLLSRPN ARQDGGAFLE MLVSHLLLAG NAYVEVVALD
GAVRELYALR PDRMKVVPGP DGWAEAYEYS VGGRSVRFDQ ASSAVPPILH LTFFHPLDDH
YGLAPIEPAA VAIDTHNAGS TWNKALLDNA ARPSGALVYS GPEGAVLSDS QFDRLKREMT
DTYQGAVNAG RPLLLEGGLD WKAMSLTPKD MDFLEAKHTA AREIALAFGV PPMVLGIPGD
NTYANFQEAN RCFFRQTVLP LASRIGNSFA QWLSPQFGDA IRIVVDPDRI DALATDRAAL
WQRVSNAAYL TLNEKREAVG YAPIEGGDRL E
|
|---|
| |