Gene Nham_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1401 
Symbol 
ID4031892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp1587101 
End bp1587679 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID637969875 
Producthypothetical protein 
Protein accessionYP_576683 
Protein GI92116954 
COG category[S] Function unknown 
COG ID[COG5436] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.537695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCG TGCTGTTTGC GATCGTCGGC GGCATCCTGC TCGGCGGGAT TGTCCATCTC 
GTCAGCGTGC TGGCGCTGCC GCGAATCGCC TCGCAGGACG CCTATTCGCG GCTGACGACG 
ATCACCACGC CGAACGCGGT GACGCAGCTG CCGCTGGCCG ATCCCGGCCA CTCGCCGATG 
CCGTTCATGG ATCCCGCATT TGCCGTCGCG GTCTGCCGCT ACGACCTGTC GGGCGGATCG 
ATCAAGCTGA CGGTGCCGGT GAGCCAGGCC TACACGTCGG TGTCGTTCTA TACCCGCAGC 
GACGTCGCCT ATTACGCCAT CAACGACCGT TCCGCCGGAC GCAAGGTGAT TGAGCTCAAC 
CTGATGACCG AAGCGCAGCA CGCGGAACTG CCCGAAGAAG AGGACGTGAC GGCGGCGGAC 
CGGCTCATCA TCGACTCTCC CTCGACGACG GGGCTGATCG TTCTGAAGGC GCTGGCGCCG 
GAGCCGGGCA TGATGGAGCA GGCGAAAGCC TCGCTCGCCG CGGCAAAGTG CCGACTACAG 
ACCGAGCCTC CCATGGTGAA GCCCGAGGCG AAGCGATAG
 
Protein sequence
MIRVLFAIVG GILLGGIVHL VSVLALPRIA SQDAYSRLTT ITTPNAVTQL PLADPGHSPM 
PFMDPAFAVA VCRYDLSGGS IKLTVPVSQA YTSVSFYTRS DVAYYAINDR SAGRKVIELN 
LMTEAQHAEL PEEEDVTAAD RLIIDSPSTT GLIVLKALAP EPGMMEQAKA SLAAAKCRLQ 
TEPPMVKPEA KR