| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1318 |
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| Symbol | |
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| ID | 4032120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1487359 |
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| End bp | 1492911 |
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| Gene Length | 5553 bp |
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| Protein Length | 1850 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969795 |
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| Product | hypothetical protein |
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| Protein accession | YP_576603 |
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| Protein GI | 92116874 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5280] Phage-related minor tail protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAACA ATCCCAAGAA GGTTAAAGAT CCGACAGAGG TCGCTCTTTC TGCCATCCAG
GAGGCGCTGA ACGTCGGCGA GGCGTCTGCG GGAGATCCAG ACCAAACTTC GGCTCGTTAC
GACATCGCCC CGCCGGTCCC GCCTGCTGCG AGCCATGGCG AGGACGGATT TGACGCCCGC
TCCACCGCAG ACCGGCCGGC CTTCGATGCC GCTGAAGGAC CGCGCTTTAC GCGGCGCCCT
GCCAACGACG ATCGTGAAAC GATCGGTCAA ATCCTTCAGG CCATCCAGAA CGGCCGCCCC
GCCCGCAATA TCTATACGCT CGCCTCGCTT TTCGCCGGCA TCTGGATTCT CGGTGCCGGC
CTTCTGACGA TCAGCTTTCT GCCCTCGCTG CAAGCTGCGA TGGGTCAAGG CAGCGGCGGC
ACGCTCGCCC TCGCCGGCCT GATTGCCCTG TTTTTCGCTC CCGTGCTGCT GTTCTACTTT
TTGGCCAGTC TGGCATGGCG CGGCCAGGAA TTGCGCATGA TCGCCCAGTC GATGGCCCAG
GTGGCGATCC GGTTCTCCGA GCCGGAGGGC CTGGCCAGTG ATTCGGTGGT GACCGTCGGA
CAGGCGATCC GCCGCGAAGT CGCCGCGATG GGCGACGGCG TCGAGCGCGC CATCGCTCGC
GCCGGCGAGT TGGAAACCCT GGTCGCCAAC GAGGTCGCCG CGCTGGAACG TGCCTATTCC
GACAACGAGG TGCGGATCCG CGCATTGCTC CAGGATATCG CGCTTCAGCG CGACAACCTC
GTCGGCCAGG CCGAGCAGGT CCGCAGCGCC ATCTCGGGTG TCCAGATCGA CCTGCGACAC
GACATTGCTC TGATCAGCGA TGCCATCGCC TCGCGCGTCG ACGAGGTCGC AAAAGGCATC
ACCGGTGCGC TGGAAGAGCG CGGCGAGCAC ATCACAACGG CACTCAGCAA TGCCGGCGAC
ACCATGATCC TTGCGCTCGG CGAACGGGGC GGCGACTTGC TCGACCGGCT TGAGGAAGCC
AGCGCCGAGA CCACGCGCGC CGTGCTCGAT GCCAGCGAGC GCCTGAACAG CAGCCTCAAT
TTCAAGACCG GTCACGTCCA CGACGAGTTC GTCGAGTTGG CCGACCGCGT CCATGACATG
CTGAACGAGC GGATCGACCG AATTACCGGC GAATTCGAGC AGAAGTCGGC GTCCATCGTC
GACGGCATTT CCGACCGCAC CGAACAGGTC CATGATTCCC TGAAAAATTC CAGCGACTCC
CTGCTGGTGG AACTCGAGCT CCGCGGCGGC GACCTGGCCA ACAAGATCGA CGAGGCCGGC
AACCGGCTGG CAACCCGGAT TCTGTCATGC GGCGACAAAG CAAGCGAAGC GCTCGACGTC
ACGGTCAATA CGCTGGTGGC CAACGTTGTC ACTCGAACCG AAACCGCGCA CGATACGCTC
AGCCTCCAGA TGAGCGCATT CGATCAACTT GTGAAGGACC AGGGCGCCGA GCTTGCGGAG
AAGTTCGCAC GCGACAGCGG CACGCTCGGC ACGCTCATTA CCCGCCACAT CTCGGAGTTC
GATCGCACGG TGAAGACTTT CGGCGGCGAG ATCGTCGATC GCCTCGGCCA GCGCACCGAA
GATATCGCCG AGACCATGAA GACCTATGTC GATACCTTCG ATACGCGGCT GACCTCCAAC
GGCGGCGAGA TCAGCGCCGC GCTGGATCAG CGTCTGGCGC AGTTCGAAAC CTCGCTCCAG
TCGAGCGTCA CCAATCTCGA CGCTTCGTTT GACGCCAAGA TCAAGTCGTT TGACGAGTCC
GTCGATGGCC GCCTGAGAAT ACTCGAGCAA ACCTTCGATT CGCGCGCAAA GTCGGTCGCG
GAAACCATCG ACAGCCGGCT CGGCACGCTC ACCTCGTCGC TGTCCGATGG CGCCGCTCAT
GCGATCGGCT CGATCGAGAG CCGCCTCACT CACCTCGCAA CGTCGCTGAC CGAAGGCGCA
ACGCAGGCCG TCGCGGCGAT CGACGGACGC ATCTCGGGGA TGACCGAAAC CATCGACGGT
CGCAGCGCTT ACCTCGCGGA TGCGATCACG GCGCGATTCC AGGAGATCCA TCAAGGCCTC
GACGAGCGCG TCGGCTTTGT CGCGACCGCG ATCGAAACGC GTGTCGCCCA GTTCGAGGAT
CTGCTCGGAT CGCGGATCGA AGCCGTGGCC GGCCGCTTTG AATCGAGCGG ACGGCAGGCC
AGCGATACAC TGTTGGCGCG CGCCGAAGAG CTCTCGCTCG GCATCAAGTC TCATGTCGAT
GACGCGGAAC GCTCGCTGAT CAATCTGGTG GTCAATACCA GCGAAACCAT TCAGACCGGC
GCGCGTACCG CCCAGCAGTC CCTGCTTTCG GTTTCGACCG AAGTGGGCGC CCAGTTGCAA
CTGACGTCAA CGGAGGTCGA GCGCGCATTG ACCACCGCCG GCACCGCTGC CGCCAACTCC
ATCCTCAACA GCGCACGCGA TGCGCAGACG ACGCTGGTCA ACTCATCCGC CGAAACCGCG
AGCCAGGTCA AATCCCTATC AGCGGATATC GAGCTGACGC TGTCCACCGC CGGCGCCAAC
ACGGCGGATT CAGTTCTCGC CGGAGCGCGC GCAGCGCAGA CCACGCTGGT CGCCGCATCC
TCGGATGCCG CGACGCATGT CAAATCGCTC GCGAGCGACA TCGAGCGGAC TCTCATGACC
GTCGGGTCCG ACGTCGAACG CATGCTGTCC GCAGTCGGCA CGTCGACCGC GGACGCCGTC
CTGTCGAGCG CGAGGACGGC CCAGACCACG CTCGTCAACA CCTCGGCCGA TACCGCAAGT
CAGGTCAAAT CGCTTGCCGG CGACATCGAG CGGACATTGA CGACGGTGGG CGCCGACACC
GCCGCCGCCA TTCTCGACAG CGCACGCGAG GCCCAGAGCA CGCTCACCAC CGCCTCGGCC
AATGCCGCAG ATCACGTCAA ATCGCTTGCG AGCGACATCG AGCAGACATT GACGGCGGCG
AGCGCCAGCA CCGCCACCGC CATTCTCGGC AGCGCACGCG AAGCCCAAAG TACGCTCACC
ACCGCCTCGG CCGATGCCGC AGGTCACGTC AAATCGCTTG CGAGCGACAT CGAGCAGACA
TTGACGGCGG CGAGCGCCAG CACCGCCACC GCCATTCTCG GCAGCGCACG CGAAGCCCAA
AGTACGCTCA CCACCGCCTC GGCCGATGCC ACAAGTCAGG TCAAATCGTT TGCAAACGAC
GTCGAGCGAA CATTGATCGC GGTGGGCGCC GACACCGCCG CCGCCATTAT AGGCAGTGCA
CGCGAGGCCC AAAGCACGCT CACCACCGCC TCGGCCGAGA CCGCAGGTCA GGTCAAATCG
CTTGCCAGCG ACATCGAGCG AACATTGATC GCGGTGGGCG CCGACACCGC CGCCGCCATT
ATAGGCAGCG CACGCGAGGC CCAGAGCACG CTCACCACCG CCTCCGCTGA TTCCGCCAGC
CAGATCAAGG CGATCTCTTC GGACATCGAG CGCTCCCTCC ACGTGGCTGC AGCGAATACC
ACGGAGATCA TTCAGGCGAG CGCGCAGAGC GCGCAGACCT CCCTCGTCTC CGCGTCGAAC
GAAGTCAGCA CCAAGGTCAA GTCGGCGTCG ACCGACGCCG AGCGCTTGAT CTTTGCCGCC
AGCGGCAGCT TCGGCACCGT GATCACCGGT AAAACGGACG AAATCGTCAA TTACGTCCAG
CAGCAGACGG ATCGTCTCAC GCAGATGATC GACAGCAAGC GCGGAGCTCT GGTCGATGCT
CTCGGCAGCA AGGCCGATCA GCTCAGCTCC GATATCGATC GCGTTACCAC CGACGCCCTC
AAGTCGATCG AGGTCAGAGG CCAGGCATTC TCGCAGTCGA TCGTTTCGAA TGGCTCCAAC
GTCGTCCGCA CCATCACCAA CGCGGGCGAA CTGGCGACCG GCGCGATCAG CAAGTCATTG
AAGGATCTCG ATCAGGCATC GCGCGCCGCC ATCGAGCAGT CTCGGCAGGC GTCCATCTCT
GCCGTCACCG AGATGCAGGA AACCAGCAAG ATCCTCCGCA CGGATACGGT CGCGCTGTTC
GAGCGGCTGC GCGAGGGCAA CATCCTTCTC CAGGAGGTCC TCACCGGCGC GCATGAAAAT
CTCAATTCGC TGGAGCGCGC GCTCGTCACG CGCGTCGCCG ACTTCGTATC GACCATGAAG
GATGTCACGT CGCAAAACGG CCTCGCGACG CAGACGCTCG AGGATCAATT GACGGTGTTC
AACACCAAGG CTTCCAAGGC TCTTGATGAT CTGGATGCGC TGTCCGGCCA GTTTGAGGCT
CACGGAAACA CTTTGATCGA GGCTGCAGCG CGGGTCGAAC AAAGCAACCA AAGCGCCACA
TCGTCGGTCG AGGAACGCAA GTCCATGCTT GATTCGCTCG TGACGACGAT CGACTTGCGG
ACGACCGACT TCGATCAGCG ACTGACACGG TTTACGAGCC TGCTCGATGA ATCGCTTGCT
GCCGCCGAAG AGCGCGCACG CGATATCGCG CGGGTGGTGG CCGAGACCGC CGGCGCCGGA
TCGGCTGCGA TCAGCCGTCA GTTCGAGGCC GTTCGCGCGA CGACCGAGGA AGAACGCCGC
CTGACATCGG AATCCATGAG CGAAATTTGC CAGCGTGCGA CTGAAGAAGC CGGCTCGATG
CTCAAGCAGT CCGCCGACAA GTTTGCGGCC CTGGTTCAGG GCATGAAGCA GATGTCTGCG
GAAATGCACA CGGAACTGGA GGCGACGCGC AACGATCTTC GTCGCGGCGT ACTTGAGATG
CCGCAGGAGG CGGCCGAGAG TACCGCCCAG ATGCGTAAGG TGATCGTCGA TCAGATCGAA
GCGCTTGCCG AACTCAACCG GATCGTCGCA CGCCATGGTC ACGGGTTCGA CGTCGTCAGC
AGCGGGCGGG CCGGCGCGCA GCGCGAGGAA GAGCCGATGA TGGCCGCCGC CGGTGGCCGC
GGCGCGACGA CGACACGCTC CGCGTCGCGT ACGCGTGACA GCGGCACTGC GTCGAACCTG
CCGCAGCCGG ATCTCGGCAT TCCGTCATCC CGCCGCACGG AGGCTCCGCC GGTCAACCCG
GCAAGTGGGG ACGATGGAGG CGACGGCTGG CTCTCGGATT TGCTGAACCG TGCCGATACC
AACGGCAACG ACCACATCCC GCGCGGACGA CCGGCACCCC AGGCTGCGGC CGCAAATCCG
CTGGACTCGC TGTCGCTCGA TATCAGCCGT CTGATGGACC GCAACCTTGC CGGCGAGATG
TGGGACCGCT ATCAGCGCGG CGAACGTAAG GCGTTCAGCA AGCGTCTCTA TACGCCCGCC
GGCCAGAAGG CCTTTGACGA GGTCGCCCGC AAATACCGTG CCGACCGCGC TTTCAAGCAG
ACGGCGGATC GCTACATCGC CGAATTCGAG CGGCTGCTGG ACGAAGTTGC GCGCGATGAG
CAGCAGGAGC CCTCAGTGAT ACGCGACCAT CTGATGTCGG AGACCGGGCT GGTCTATACC
TTGCTCGCGC ATGCGGCGGG CCGGCTCGGA TAA
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| Protein sequence | MANNPKKVKD PTEVALSAIQ EALNVGEASA GDPDQTSARY DIAPPVPPAA SHGEDGFDAR
STADRPAFDA AEGPRFTRRP ANDDRETIGQ ILQAIQNGRP ARNIYTLASL FAGIWILGAG
LLTISFLPSL QAAMGQGSGG TLALAGLIAL FFAPVLLFYF LASLAWRGQE LRMIAQSMAQ
VAIRFSEPEG LASDSVVTVG QAIRREVAAM GDGVERAIAR AGELETLVAN EVAALERAYS
DNEVRIRALL QDIALQRDNL VGQAEQVRSA ISGVQIDLRH DIALISDAIA SRVDEVAKGI
TGALEERGEH ITTALSNAGD TMILALGERG GDLLDRLEEA SAETTRAVLD ASERLNSSLN
FKTGHVHDEF VELADRVHDM LNERIDRITG EFEQKSASIV DGISDRTEQV HDSLKNSSDS
LLVELELRGG DLANKIDEAG NRLATRILSC GDKASEALDV TVNTLVANVV TRTETAHDTL
SLQMSAFDQL VKDQGAELAE KFARDSGTLG TLITRHISEF DRTVKTFGGE IVDRLGQRTE
DIAETMKTYV DTFDTRLTSN GGEISAALDQ RLAQFETSLQ SSVTNLDASF DAKIKSFDES
VDGRLRILEQ TFDSRAKSVA ETIDSRLGTL TSSLSDGAAH AIGSIESRLT HLATSLTEGA
TQAVAAIDGR ISGMTETIDG RSAYLADAIT ARFQEIHQGL DERVGFVATA IETRVAQFED
LLGSRIEAVA GRFESSGRQA SDTLLARAEE LSLGIKSHVD DAERSLINLV VNTSETIQTG
ARTAQQSLLS VSTEVGAQLQ LTSTEVERAL TTAGTAAANS ILNSARDAQT TLVNSSAETA
SQVKSLSADI ELTLSTAGAN TADSVLAGAR AAQTTLVAAS SDAATHVKSL ASDIERTLMT
VGSDVERMLS AVGTSTADAV LSSARTAQTT LVNTSADTAS QVKSLAGDIE RTLTTVGADT
AAAILDSARE AQSTLTTASA NAADHVKSLA SDIEQTLTAA SASTATAILG SAREAQSTLT
TASADAAGHV KSLASDIEQT LTAASASTAT AILGSAREAQ STLTTASADA TSQVKSFAND
VERTLIAVGA DTAAAIIGSA REAQSTLTTA SAETAGQVKS LASDIERTLI AVGADTAAAI
IGSAREAQST LTTASADSAS QIKAISSDIE RSLHVAAANT TEIIQASAQS AQTSLVSASN
EVSTKVKSAS TDAERLIFAA SGSFGTVITG KTDEIVNYVQ QQTDRLTQMI DSKRGALVDA
LGSKADQLSS DIDRVTTDAL KSIEVRGQAF SQSIVSNGSN VVRTITNAGE LATGAISKSL
KDLDQASRAA IEQSRQASIS AVTEMQETSK ILRTDTVALF ERLREGNILL QEVLTGAHEN
LNSLERALVT RVADFVSTMK DVTSQNGLAT QTLEDQLTVF NTKASKALDD LDALSGQFEA
HGNTLIEAAA RVEQSNQSAT SSVEERKSML DSLVTTIDLR TTDFDQRLTR FTSLLDESLA
AAEERARDIA RVVAETAGAG SAAISRQFEA VRATTEEERR LTSESMSEIC QRATEEAGSM
LKQSADKFAA LVQGMKQMSA EMHTELEATR NDLRRGVLEM PQEAAESTAQ MRKVIVDQIE
ALAELNRIVA RHGHGFDVVS SGRAGAQREE EPMMAAAGGR GATTTRSASR TRDSGTASNL
PQPDLGIPSS RRTEAPPVNP ASGDDGGDGW LSDLLNRADT NGNDHIPRGR PAPQAAAANP
LDSLSLDISR LMDRNLAGEM WDRYQRGERK AFSKRLYTPA GQKAFDEVAR KYRADRAFKQ
TADRYIAEFE RLLDEVARDE QQEPSVIRDH LMSETGLVYT LLAHAAGRLG
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