Gene Nham_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1316 
Symbol 
ID4032118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1485310 
End bp1486080 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID637969793 
ProductABC transporter related 
Protein accessionYP_576601 
Protein GI92116872 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCG ACGCATCCGA TCCCATTGTC CGCGTTCGCG ACATCTCCGT CCGGTTCGGC 
GCCACGAAGG TGCTGGACGG CTTGAGCCTG GACGTGAAGC GCGGCGAGAT TCTCGGCTTC
GTCGGTCCAT CAGGGGCGGG CAAGTCGGTG CTGACGCGCA CGATCATCGG GCTCGTGCCG
AAGATCGGCG GCAGCATCGA GGTTTTCGGC GTCGATCTCC AGACTGCGGA TCCGACGGCG
CGGCGCGCGG TCGAACGCCG CTGGGGAGTG CTGTTTCAGC AGGGTGCGCT GTTTTCGTCG
CTGAACGTCC GTCAGAACAT CCAGTTCCCA GTGCGGGAAT ATCTCAACGT GTCGCAGCGG
CTGCTCGACG AGATCACTAT CGCCAAGCTC GGCATGGTCG GATTGCTGCC GGAGGTCGCG
GACCGCTATC CATCCGAACT GTCGGGCGGA ATGATCAAGC GGGTGGCGCT GGCGCGGGCG
CTGGCGCTCG ATCCGGAGCT GGTCTTCCTC GATGAGCCGA CATCGGGCCT CGATCCGATC
GGGGCGGGGG ATTTCGACGA CCTGGTGCGG ACGCTGCAGC GCACTTTGGG GCTGACGGTT
TTCATGGTAA CCCACGATCT GGACAGCCTT CATACGGCTT GCGACCGCAT CGCCGTTTTA
GGGAACGGTA AGATCATTGC AGCAGGATCG ATGGCCGACA TGCTGGCCTC GCAGCATCCC
TGGTTGAGAG CCTATTTTCA CGGCAAGCGT GCCCGCGCCG TCGTGGGTTG A
 
Protein sequence
MAGDASDPIV RVRDISVRFG ATKVLDGLSL DVKRGEILGF VGPSGAGKSV LTRTIIGLVP 
KIGGSIEVFG VDLQTADPTA RRAVERRWGV LFQQGALFSS LNVRQNIQFP VREYLNVSQR
LLDEITIAKL GMVGLLPEVA DRYPSELSGG MIKRVALARA LALDPELVFL DEPTSGLDPI
GAGDFDDLVR TLQRTLGLTV FMVTHDLDSL HTACDRIAVL GNGKIIAAGS MADMLASQHP
WLRAYFHGKR ARAVVG