Gene Nham_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1312 
Symbol 
ID4032114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1480782 
End bp1481831 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID637969789 
Productglycosyl transferase, group 1 
Protein accessionYP_576597 
Protein GI92116868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCC TGATCGCAAC CGACGCGTGG CATCCGCAGA TCAACGGCGT GGTGCGGACG 
CTGGCGATGA CCGCCGCCGC GGCGAAGCCG CTTGGCGCCG ACATCCATTT TCTCACCCCG
CAGTCGTTCC GGACCGTTGC GCTGCCGGGC TATCCCGGGC TGCGCGTCGC GCTGCCGGCG
CCCGGCAGGA TCGCCGCGCT GATTGCAGAA GTCGATCCCG ACAGCATTCA CATCGCGACC
GAAGGGCCGA TAGGTCTTCT GGTGCGCCGC TATTGCCGCA AGCACGGGCG GCCCTTCACG
ACCAGCTTCC ATACCCGCTT TCCGGACTAC GTTTCGGCGC GGGCGCCGAT TCCAGTTTCC
TGGATATGGG CCGCGCTAGG TCGGTTTCAT GGTGCCAGCA GGGCCGTCAT GGCGGCAACC
CCGGCGCTTG CGGGCGAATT GCGCCAGCGC GGCTTTCGCA ATGTGGTGTT ATGGCCGCGC
GGAGTCGACG TCGGATTGTT TCATCCGCGC GCGACCGACC TCGGCCTGCC GCGCCCGATC
TTCCTGTCGG TCGGACGCGT TGCGGTCGAG AAGAACCTCG ATGCTTTTCT CGGCCTCGAC
CTTCCCGGGA CCAAGGTTGT CGTCGGCGAT GGACCGGCGC GCGCGGCTCT CGAGCGGACC
TATCCGGATG CGGTCTTTCT CGGCGCGCGC ACGGGCGAAC AACTCGCGAA AACCTATGCC
GCTGCTGACG TCTTTGTATT CCCGAGCCGC ACCGATACCT TTGGTCTGGT TCTTCTTGAA
GCGCTGGCGA GCGGCGTTCC GGTCGCGGCC TTTCCGGTGA GCGGCCCCCG CGACGTCATC
GGAGACGCTG CGGTCGCCGC TTTGGACGAC GATTTACGGT CGGCGTGCCT GGCGGCGCTG
AAAATCGCGC CCGCGGCCTG CCTTGAGTTT GCCGCAAGCC TGACATGGGA GAAATCGGCT
CGCGCCTTCG TTACCAATAT CATCGAGGCT TGTGCGGCTG AGGCGAGATC GGCAAATACA
CACATTGCCG GTCCGCGTTT CATCGCCTGA
 
Protein sequence
MRILIATDAW HPQINGVVRT LAMTAAAAKP LGADIHFLTP QSFRTVALPG YPGLRVALPA 
PGRIAALIAE VDPDSIHIAT EGPIGLLVRR YCRKHGRPFT TSFHTRFPDY VSARAPIPVS
WIWAALGRFH GASRAVMAAT PALAGELRQR GFRNVVLWPR GVDVGLFHPR ATDLGLPRPI
FLSVGRVAVE KNLDAFLGLD LPGTKVVVGD GPARAALERT YPDAVFLGAR TGEQLAKTYA
AADVFVFPSR TDTFGLVLLE ALASGVPVAA FPVSGPRDVI GDAAVAALDD DLRSACLAAL
KIAPAACLEF AASLTWEKSA RAFVTNIIEA CAAEARSANT HIAGPRFIA