Gene Nham_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1219 
Symbol 
ID4032271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp1375689 
End bp1376273 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID637969698 
Producthypothetical protein 
Protein accessionYP_576507 
Protein GI92116778 
COG category[S] Function unknown 
COG ID[COG5480] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.530921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT CAGACCAATG CCTTCCTCCA CCGTTCTCGC GGCGCGTGAG CACTGCGGGC 
CTCTTGCCTG CGCTCGGCAT CCTCGTCGTC TGTCTGTGGT CGGCGCCCGC GGCAGCGGAC 
TTCCGGCTCT GCAACAACAC GCCGGGCCGC GTCGGCATCG CCCTCGGCTA CAAGGACGCC 
GAGGGCTGGA CCACCGAGGG CTGGTGGAAC GTCTCATCGC GTGCCTGCGA AACGCTGCTG 
CGCGGCACGC TCATCGCACG TTATTATTAT ATTTATGCTC TAGATTACGA CCATGGCGGC 
GAATGGTCGG GACAGGCTTT CATGTGCTCG CGCGATAAAG AATTCACCAT CAGAGGTACC 
GACAATTGCC TCGCGCGCGG TTTCGACCGC ACCGGCTTCT TCGAGATCGA TACCGGCGAC 
CAGCGCGCGT GGACCGTGCA ATTGACGGAG TCCGGCGAAC ACGGACCGCA GCGCGTGCCA 
GGGTTGCCTG CGCCGGGCGC GGTTCCGAGT CTGCCCGATC CCGCGGGCGG AACGCCTCCA 
GGCGTAGGAC TGACGCCAGA TGCGTTGCCC GGACGCAAGC CATGA
 
Protein sequence
MTKSDQCLPP PFSRRVSTAG LLPALGILVV CLWSAPAAAD FRLCNNTPGR VGIALGYKDA 
EGWTTEGWWN VSSRACETLL RGTLIARYYY IYALDYDHGG EWSGQAFMCS RDKEFTIRGT 
DNCLARGFDR TGFFEIDTGD QRAWTVQLTE SGEHGPQRVP GLPAPGAVPS LPDPAGGTPP 
GVGLTPDALP GRKP