| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1213 |
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| Symbol | |
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| ID | 4032265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1368994 |
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| End bp | 1370805 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637969692 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_576501 |
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| Protein GI | 92116772 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGACC GAGCGCTGGA ATTTGACTGG TCCGCGACTG ACCTTGGCCC GATCGACGAC
TGGCCGGAAT CGTTGAAAGC TACAGCCAGA CTTGTTTTCT CCGCATCGAC TCCTCTCGCC
ATTCTTGCAG GACCGACCGG GGTCTTGATC TACAACGACG CGATCAAGAC AATCTTCGGC
GGAATCGGCG CCGATGGCCT TGGTCGGTCG GTGCTCGACG TCCTGCCCGA CGCCTCTGAT
TTCTATCGTG AAATCATCGC TCTATGTGCG GCTGGAGAGG CACCCTCATT TCGTGATCGG
ATCCTCAAGA TCGACCGCAA TGGCGGCAGC GAAACCGCCT GGTTCGATCT CGACTTCACA
CCGGTGATCG AAGGTGACGG CACCCACAGC GCCGTACTGG TCCATGCGTT CGAAACAACC
GAGAAGGTCC GCGCTCTGCG AGCTCTCCAG CGCTCGGAAG AGCAGCTGCA GCTGGCGCTC
GACGCGTCGG GCATGATCGG CATCTGGGAT TTCGACCTGA CGACCGGCAT GGTCATGGTC
GATGACCGAT TCATAAAGCT GTTCGGTATC GAGGGAGCGC GAAGTTCCGA GGGCACTCCG
CTCGCGGCAT TCACAGAGCG TATTGATATT GACGACCGCG ATCGTGTCAT CCGCGAAATC
GATGCCGCGA TCAAGACCGG CGCCGATTTC CGGTCGCAAT ATCGTGTGTC CGACAGTGCC
GGCAAGATGC ATTCGGTTCT CGCATCCGGT CGGGTGATCA ATGATGCCGC AGGCAAACCC
GTACGTTTCC CGGGAGTCGC GGTGGAAGTG ACCGCACAGG TGGAGGCAAA CGCTGCGCTT
ATCGCAAGCG AAGTGCGTTT CCGTACCCTT GCGGACACCA TCCCGCAGAT CATCTGGAGT
TCCGACGGCG ATGGACGACA CGATTATTTC AGCAACAGAT GGAACGAATT CACCGGGCTA
AACCCTGCTG CCGACGCCGA TATCTGGAAA GATCTCATTC ACCCCGAAGA TAGGGAGCGG
GTCTTCGCCG TCTGGAGCAA TTCGCGGGAG ACCGGCAAAC CCTATGAGAT CGAATACCGC
TTCCGTCACC ATAGCGGCGT GTATCGGTGG CTTTTAGTCA TGGCCCTACC ACAGCGGAAT
GCGAACGGGC ACATCAGCCG CTGGTTTGGC ACGAGCACTG ACATTCATGA AGTCAAGCTC
ATTGCTGTCG AGCGTGAAAT CATCGCGCAT GAACTCCATC ATCGCATCAA GAATCTGTTT
TCCATATTCG GCGCGCTGGT CAATCTGTCG GCGCGCTCTG CGCAGAACGT CGGAACCTAC
GCTACCGATT TGACCGGCCG GATCATGGCG CTCAGCAAGG CTCATGATTT CGTGCGGCCT
ACATCAGCGC TTTTGGCGGC GCAGACTCTC CAAGCGCTCG TGCAACGCCT TCTCAGTCCC
TATGCGGGCG CGCATGGATC ACGGCTGTTC TGTGAGGGAG AGGACGTCCC GCTCAGCGAG
GGCGCCGCAA CATCCTTCGC GCTGGTCTTT CATGAGCTTG CCACCAATGC TGCGAAATAT
GGCGCCCTTT CTGTCCCGGA TGGCCACGTT CTACTCAAGA CTCAGTTGGA GGGTGGCCGC
TTGCAGACGA CCTGGAAAGA AACAGGATCG ACAGCGATCG ATGGATCATC CACCTTGGGA
GGCTTTGGGT CGAAGCTTCT CACGCTGATG GTGGAAGGGC AGATGCACGG CAAGGTCGAA
CGGCATTGGG AAGCTGATGG ACTGAGGGTC GAGATCGATA TTCCCGCCCA ATCCATTGTA
CCCATACGAT GA
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| Protein sequence | MLDRALEFDW SATDLGPIDD WPESLKATAR LVFSASTPLA ILAGPTGVLI YNDAIKTIFG
GIGADGLGRS VLDVLPDASD FYREIIALCA AGEAPSFRDR ILKIDRNGGS ETAWFDLDFT
PVIEGDGTHS AVLVHAFETT EKVRALRALQ RSEEQLQLAL DASGMIGIWD FDLTTGMVMV
DDRFIKLFGI EGARSSEGTP LAAFTERIDI DDRDRVIREI DAAIKTGADF RSQYRVSDSA
GKMHSVLASG RVINDAAGKP VRFPGVAVEV TAQVEANAAL IASEVRFRTL ADTIPQIIWS
SDGDGRHDYF SNRWNEFTGL NPAADADIWK DLIHPEDRER VFAVWSNSRE TGKPYEIEYR
FRHHSGVYRW LLVMALPQRN ANGHISRWFG TSTDIHEVKL IAVEREIIAH ELHHRIKNLF
SIFGALVNLS ARSAQNVGTY ATDLTGRIMA LSKAHDFVRP TSALLAAQTL QALVQRLLSP
YAGAHGSRLF CEGEDVPLSE GAATSFALVF HELATNAAKY GALSVPDGHV LLKTQLEGGR
LQTTWKETGS TAIDGSSTLG GFGSKLLTLM VEGQMHGKVE RHWEADGLRV EIDIPAQSIV
PIR
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