Gene Nham_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1156 
Symbol 
ID4032556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp1309994 
End bp1310524 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content59% 
IMG OID637969652 
ProductISSpo6, transposase OrfB 
Protein accessionYP_576461 
Protein GI92116732 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.279659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGC AGCGCGAGCG GCTGATCTTC ATTGACGAAA CCGGCACCAC CACCAAGATG 
GTTCGCCAGC GTGGACGATC GCTGAAAGGA ACGCGGCTGA ACAGCAAGGC TCCATTCGGT 
CACTGGGGAA CGCAGACCTT CGTAGCAGGC CTCAAGTGCG ATGGCCTCGT CGCCCCCTGG 
GTTATCGATG CCCCAATGAA CCGGATCATC TTCGAGACCT ATGTCGACAC CCAACTCGCG 
CCCGCCCTCA GGCCCGGTGA TGTCGTCATC CTGGATAATC TCTCCAGCCA CAAGAGCGAG 
AAGGCCGAAA AAGCCATCCG CGCACGGGGC GCGTGGCTCC TGTTCCTGCC GCCCTACAGC 
CCGGATCTCA ATCCCATCGA AATGGCCTTC GCAAAACTGA AAGCTCATCT GCGAGCCGCC 
GCAGCCAGAA CCATCGACGC TCTCTGGAAA GCTATCGGCA ACATCTGCGC GCTCTTCTCT 
CCGCAAGAGT GCTCAAACTA CTTCAAAGCC GCAGGATACG GATTCAATTG A
 
Protein sequence
MHKQRERLIF IDETGTTTKM VRQRGRSLKG TRLNSKAPFG HWGTQTFVAG LKCDGLVAPW 
VIDAPMNRII FETYVDTQLA PALRPGDVVI LDNLSSHKSE KAEKAIRARG AWLLFLPPYS 
PDLNPIEMAF AKLKAHLRAA AARTIDALWK AIGNICALFS PQECSNYFKA AGYGFN