Gene Nham_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1153 
Symbol 
ID4032553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1308251 
End bp1309078 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID637969649 
Productsignal transduction histidine kinase 
Protein accessionYP_576458 
Protein GI92116729 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.614752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGTAA AGTCAGCGAT GTTTGAGACC GATCGTTATC GTCGTCTAGA ACGCCAACCT 
TCTAACGGCG CAGCACGACC TCACGACTTT CTAGAGGCAG AGAATATCAG CCTTCGATTG
CTGTTGGCGC AGGCCGAAAT CGATGCCCAG GGTTTGCTGG CTCAGGCCGG CATTGACGCC
CGCGAGCGTG ACGCATCCGA CAAGCTGCAG AAGCTGATCC TGGAAGAGCT TCATCATCGC
ATCAAGAATA CACTCGCGAC GGTCAGCGCC ATCGCCACCC AGAGTCTTCG CCACGTGCAG
GGCACCGAAC ACGCGCAGCA CGCCATAGCG GGCCGGCTGC AGGCGCTCGG GCGAGCTCAC
GATCTCCTTC TACAGGCAAG ATGGAACAGC GCCGACCTTA GCCATATCGT CCGCAGCGCC
ACCGAAGCCT TCGACAATCC GGACGTTCCG AAATTCTCGA TTGCAGGACC GGACATCCAG
ACGACGTCGG GCGCCGTGAT CGCCATAGCC ATGACGCTCA ACGAGCTCTG CACGAACTCC
ACGAAATTCG GAGCTCTGTC GGAGCCGACT GGGCGTGTCG ACATCGCCTG GACGCTGGAT
CCAAAGACGC AGCGCGTGCA CCTGACATGG ACCGAAATGA ACGGTCCAGT AGTTCACGCT
CCGGAAAACC ACAGTTTCGG GACGCGCCTC ATCGAGACGC TAGGCAAGCA GCTCAAGGGC
GACGTGCAGT TGACGTATCA GCCGACAGGT TTCGTCTACG CGATCGACGT GCCGTTGGCT
TCCCTGACGT CAGCGGGTGG CGGCGTGATA AGCAAATATG AGGCGTGA
 
Protein sequence
MVVKSAMFET DRYRRLERQP SNGAARPHDF LEAENISLRL LLAQAEIDAQ GLLAQAGIDA 
RERDASDKLQ KLILEELHHR IKNTLATVSA IATQSLRHVQ GTEHAQHAIA GRLQALGRAH
DLLLQARWNS ADLSHIVRSA TEAFDNPDVP KFSIAGPDIQ TTSGAVIAIA MTLNELCTNS
TKFGALSEPT GRVDIAWTLD PKTQRVHLTW TEMNGPVVHA PENHSFGTRL IETLGKQLKG
DVQLTYQPTG FVYAIDVPLA SLTSAGGGVI SKYEA