| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1115 |
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| Symbol | |
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| ID | 4031565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1260433 |
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| End bp | 1261680 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637969612 |
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| Product | major facilitator transporter |
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| Protein accession | YP_576422 |
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| Protein GI | 92116693 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAAGC CCGTCATCGC CTCCGAGGAA ACGCAGGTCG CGCCGGTCGT GGTTCCCGGG
GTTGCCGAAA AGGCGGCCGT CGGTCCCGTT TATCTTGTGC TCGGCGGCAT CAGCTTCTCG
CATTTTCTGA ACGACACCAT GCAGTCGTTG ATTCCCTCGG TCTATCCGAT CCTGAAGGAG
AACTACGCGC TCGACTTCGC CCAGATCGGA ATGATTACTC TGGCATTTCA GGTGACGGCG
TCGCTGCTGC AACCCGTGGT CGGCTATGTC ACCGACAAGA AGGCTCAGCC GTTCTCGCTC
GCCATCGGCA TGGGTTCTAC TTTCGTCGGG TTGCTGCTGC TGAGCGTAGC GCATGTCTAC
GGGATGATCC TTGTTTCCGC CGGACTTGTC GGTCTGGGCT CCGCGGTGTT CCATCCGGAG
TCCTCGCGCA TCGCGCGGAT GGCGTCGGGC GGACGTTATG GATACGCCCA AGCGGTGTTT
CAGGTCGGCG GCAATTTCGG CTCGGCGATG GGGCCGATGC TGGCGGCGCT GATCGTGGTG
CCGTTCGGCC AGCCGAGCAT CGCCTGGTTC TCTGTGATTG CGGCAACCGC GATCCTGATC
CTTTGGCGAA TCGGGCGCTG GTACAAGCCG CTGATCGCCC CACGCGTCAG CAAGGCGGTG
GCGCGCCAGC CCAACGCGCC GTCACCGCGG CGCACGGCGC TGGCGATCGC CATCCTGATC
GTGCTGGTGT TTTCCAAGTT CATCTACATG GCGAGCCTGA CCAGCTACTA CACGTTCTTC
CTGATTCACA AGTTCGGCGT TTCGACCCAG ACGTCGCAGA TATTCCTGTT CATGTTCCTC
GCCGCAACCG CGGTCGGCAC CTATTTCGGC GGCCCGATCG GCGACCGGAT CGGCCGTCGC
TATGTGATCT GGTTCTCGAT CCTCGGAGTG CTGCCGTTCA CCCTGCTGCT GCCGTTCGCC
AACCTGTTCT GGACCGCGAT ACTGAGCATC GTCATCGGCT TTGTCATCTC CTCGGCGATG
CCAGCGATCA TTGTGTTCGC GCAGGAACTG ATGCCGCATC GCTTCGGCAT GATCTCGGGG
ATGTTCTTTG GCTTTGCGTT CGGCGCCGGA GGACTTGGAG CGGCGCTGCT CGGTGAGGTC
GCGGACGCGA AGGGAATCGA GTTCGTCTAT CAGGCCTGCG CGTTCCTGCC GGCGATCGGC
CTGCTTGCGA TGTTCCTGCC GAAGATGCCG AAAATCCGGC ACGGGTAG
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| Protein sequence | MDKPVIASEE TQVAPVVVPG VAEKAAVGPV YLVLGGISFS HFLNDTMQSL IPSVYPILKE
NYALDFAQIG MITLAFQVTA SLLQPVVGYV TDKKAQPFSL AIGMGSTFVG LLLLSVAHVY
GMILVSAGLV GLGSAVFHPE SSRIARMASG GRYGYAQAVF QVGGNFGSAM GPMLAALIVV
PFGQPSIAWF SVIAATAILI LWRIGRWYKP LIAPRVSKAV ARQPNAPSPR RTALAIAILI
VLVFSKFIYM ASLTSYYTFF LIHKFGVSTQ TSQIFLFMFL AATAVGTYFG GPIGDRIGRR
YVIWFSILGV LPFTLLLPFA NLFWTAILSI VIGFVISSAM PAIIVFAQEL MPHRFGMISG
MFFGFAFGAG GLGAALLGEV ADAKGIEFVY QACAFLPAIG LLAMFLPKMP KIRHG
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