Gene Nham_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0971 
Symbol 
ID4031809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1073759 
End bp1074904 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID637969473 
Producthypothetical protein 
Protein accessionYP_576283 
Protein GI92116554 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.31513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCTG ACTCCGCCAC ATGGATCCCG CGCCTCCGGC GCGCGTTTAT CCGGATACAC 
CGATGGCTTG GATTCAGCGC CGGCGTCATC GTCGTGTTGG TCGGTCTCAC CGGCAGTTTC
ATCGTCTTTT ACCGGGAGAT CGACGCGGCG CTGAACCCGG CGCTCTACGC TCCGGTTGGC
CCAGAGCAAA CAGTCGCTGT CAACGAAGTG ATGCGGGCCG CAGCAGAAGT GGACGCGGCG
CCGATCACGG CAATCGTAGC TCCAGACCGG ATCTGGCCTG TCTGGGTCGT GATCCACACC
CACCCGAGCA AGAAGGGCCG TTATCCAAAT CGCTGGACGA CCATGATCGA TCCTTCGAAC
GGGCAAGTGC TCGGGCACCG CGACTACACG AACGCATTCG CGTTCACAGT CTATCGTCTG
CACTACACGC TGTTGCTTTA TGAATGGTGG GGCCGGGATC TGGTCGGCGT GGTTGGGTTG
GCGCTCCTGG GTTCGACCCT GTCCGGTTTG TGCTTGTGGT GGCCAAGGCG AGGCGGTTTC
CGGCGATCGA TATCGGTTCG CAACGGCGTT TCGCCCCAGC GATTCACTAT CGACCTTCAC
AATGCGGTCG GCTTTTGGGC GCTGATCGCG CTTGCCGTGA TCTCGGCCAC GGGTGTCGGC
ATCGTTTTCC CCGAGGCCAT GCGTCCCGTC GTTAGCCTTG TGTCGCCGGC GACACCCTAC
CCCTCACCAA AGGTCGATAT CCCACCCCCG AAAGGAACGC CGCTACTGTC GGCGGATGCG
ATCGTCGCGA TGGCGCGGGC AACAAAACCG AGGCAGGACA TCGCGGTCCT GAACCCTCCG
GTCGAGATGC GCAACACGTG GCGCGTGCTG TTCCGCCCGG CGGCGGGAAC CGATCCCGCC
GTGCGTTCGC GTGGGGCGAT CTGGTTTGAC CCGTGGAAAG GCGCGGTCGT GCACGACCGC
TTCTCGGACA TGTCGATGGG CGATCGCTAC ATGACCGAAC AGCTATGGCT CCACAATGGA
GGAACGCTCG GCTTTGTCGG CCGCCTGATC GTATTCATAT CCGGCTTCGC ACCACTCGCC
TTGTTCGTGA CCGGCTGCAC AATCTGGCTC AACCGGCGAT CAGCAAGGAA GGCCTTGCAA
AACTGA
 
Protein sequence
MNADSATWIP RLRRAFIRIH RWLGFSAGVI VVLVGLTGSF IVFYREIDAA LNPALYAPVG 
PEQTVAVNEV MRAAAEVDAA PITAIVAPDR IWPVWVVIHT HPSKKGRYPN RWTTMIDPSN
GQVLGHRDYT NAFAFTVYRL HYTLLLYEWW GRDLVGVVGL ALLGSTLSGL CLWWPRRGGF
RRSISVRNGV SPQRFTIDLH NAVGFWALIA LAVISATGVG IVFPEAMRPV VSLVSPATPY
PSPKVDIPPP KGTPLLSADA IVAMARATKP RQDIAVLNPP VEMRNTWRVL FRPAAGTDPA
VRSRGAIWFD PWKGAVVHDR FSDMSMGDRY MTEQLWLHNG GTLGFVGRLI VFISGFAPLA
LFVTGCTIWL NRRSARKALQ N