Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0964 |
Symbol | |
ID | 4031802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1068813 |
End bp | 1069538 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637969466 |
Product | ABC transporter related |
Protein accession | YP_576276 |
Protein GI | 92116547 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATGA ATGCAACCTA CCCTAGCGTC GTTCACTGTC GCGGTCTGAC GAAGGCGTTC GGTGTCGGTT CTACCGCAAC GTACGCGCTG CAGGGAGTCG ATCTCGACGT CAGAGTTGGC GAGATATTGA TGATTATGGG GCCTTCGGGA TGCGGGAAGA CGACCCTGCT TTCCGTAGTT TCTACCCTGC TCGACCTCGA TGCGGGGACT TGCGAGGTTC TTGGACGAGA TCTTGCGCGA ATGAACCAGA TCGAGCGTTC ACGCTTTCGC TGCGCGACGA TGGGGTTCGT TTTTCAAAGG TTCAATCTAC TGCCGGGCGT TTCGATCCTC GACAACGTCA CCGTCCCTCT TCTGATCGGC GGGCACTCCC GCAAAGACGC CGAAAGCAGG GCCGTTAGGA TTCTGGACGA ACTGGGTCTT CGCGATCGCA CTTCGGCGTC ACCGAACGAG TTGAGCGGAG GCCAACAGCA GCGAGTGGCT ATCGCCCGCG CCCTCGTCCA CAACCCGAAA CTCATCGTTT GCGACGAGCC AACGAGCGCG CTTGATCAAA ATACAGGACA GGTCGTGATG GAGACGCTAC GCGACCGGGC TCGACAGACC GATCGCGCGG TGATCGTCGT TACCCACGAC ACACGCATCG TGAACTACGC GGATCGGATC GTGCGGATGG AAGATGGAGT AATCATCGGC TGCAACGGTG CCATCGAAGC GGAGATGCCG TCATGA
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Protein sequence | MAMNATYPSV VHCRGLTKAF GVGSTATYAL QGVDLDVRVG EILMIMGPSG CGKTTLLSVV STLLDLDAGT CEVLGRDLAR MNQIERSRFR CATMGFVFQR FNLLPGVSIL DNVTVPLLIG GHSRKDAESR AVRILDELGL RDRTSASPNE LSGGQQQRVA IARALVHNPK LIVCDEPTSA LDQNTGQVVM ETLRDRARQT DRAVIVVTHD TRIVNYADRI VRMEDGVIIG CNGAIEAEMP S
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