Gene Nham_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0964 
Symbol 
ID4031802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1068813 
End bp1069538 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID637969466 
ProductABC transporter related 
Protein accessionYP_576276 
Protein GI92116547 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATGA ATGCAACCTA CCCTAGCGTC GTTCACTGTC GCGGTCTGAC GAAGGCGTTC 
GGTGTCGGTT CTACCGCAAC GTACGCGCTG CAGGGAGTCG ATCTCGACGT CAGAGTTGGC
GAGATATTGA TGATTATGGG GCCTTCGGGA TGCGGGAAGA CGACCCTGCT TTCCGTAGTT
TCTACCCTGC TCGACCTCGA TGCGGGGACT TGCGAGGTTC TTGGACGAGA TCTTGCGCGA
ATGAACCAGA TCGAGCGTTC ACGCTTTCGC TGCGCGACGA TGGGGTTCGT TTTTCAAAGG
TTCAATCTAC TGCCGGGCGT TTCGATCCTC GACAACGTCA CCGTCCCTCT TCTGATCGGC
GGGCACTCCC GCAAAGACGC CGAAAGCAGG GCCGTTAGGA TTCTGGACGA ACTGGGTCTT
CGCGATCGCA CTTCGGCGTC ACCGAACGAG TTGAGCGGAG GCCAACAGCA GCGAGTGGCT
ATCGCCCGCG CCCTCGTCCA CAACCCGAAA CTCATCGTTT GCGACGAGCC AACGAGCGCG
CTTGATCAAA ATACAGGACA GGTCGTGATG GAGACGCTAC GCGACCGGGC TCGACAGACC
GATCGCGCGG TGATCGTCGT TACCCACGAC ACACGCATCG TGAACTACGC GGATCGGATC
GTGCGGATGG AAGATGGAGT AATCATCGGC TGCAACGGTG CCATCGAAGC GGAGATGCCG
TCATGA
 
Protein sequence
MAMNATYPSV VHCRGLTKAF GVGSTATYAL QGVDLDVRVG EILMIMGPSG CGKTTLLSVV 
STLLDLDAGT CEVLGRDLAR MNQIERSRFR CATMGFVFQR FNLLPGVSIL DNVTVPLLIG
GHSRKDAESR AVRILDELGL RDRTSASPNE LSGGQQQRVA IARALVHNPK LIVCDEPTSA
LDQNTGQVVM ETLRDRARQT DRAVIVVTHD TRIVNYADRI VRMEDGVIIG CNGAIEAEMP
S