Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0956 |
Symbol | |
ID | 4031775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1056891 |
End bp | 1057922 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969459 |
Product | periplasmic binding protein |
Protein accession | YP_576269 |
Protein GI | 92116540 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.94277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCAAC GTAAAATAGT CGAACGCAGG CCGGTTGCAC TTTTCGCGTG CGTTGCGGCG CTTATAACGT GGACGACATA CGCGCTGGCT GACCGCACGA TCACAGACAT GGCAGGCCGC AGCGTGGTCA TCGCCGATCG TGTGACGCGT GTGGCGACCA TTGGCCCTGT CCCGGTACTC AACAGCTTCG TGTTCGCACT TGGCGAGGCA AAATCGCTCG TCAACGGCCT GCCGCCGAAC CTGTCCGGTC CGCGCTGGCG CATGCAGTAT CTGGTCGATC CCGATATCGC CCAGCTCCCC GTACTGCAGA GCGGCGGCGG CGCGCCGCTC GTCGAAGGCC TCGTCGAGAC GAAGCCGGAT ATCATCCTCA CCATGGACCG GCAGACTATC GATCTTGTGG CCCGCGCTCA CACACCCGCG GTATTCCTGG CATGGCGGCA GCCGGAGGAT GTGAAGGCGG TGATGCGTCT GCTTGGCCAG ATCTACGGCA AGGCCGAGGC GGCAGAAGCC TATTGCAGCT ACTTCGATGC CACCCTTGGC AACATCAGCG CGCGGTTGGC GCAGCAGCCG GCGCGGCGGC CACGGGTGCT CTATGCCAAT CTCAAGCGCA TGACTCAGCC GCACCTTATT GCCGAGTGGT GGATCACCAA GGCCGGCGGT CGCAGCGTCA CGGATGGCGA ACGTTCCACA GAGGCGCTCA CCTTCTCCCG CGAGCAGCTT CTGGCATGGG ACCCGGAAGT GATGATTCTC AGTGGCGCGG TCGAGGTTGC CGAGGCCTAC GCCGATCCAC GCCTCAGCAC CGTCTCGGCC ATCCGCAATC GTCGCGTCGT AGCTATTCCA GCCGGCGTGC ATCTGTGGGG CAACCGCACC GTCGAGGAGC CGCTGACCGT GCTCTGGGCG GCGCAGCTTA TCCATCCCGA TCTGTTCAAG GATTGGGACA TCCGCGACGA AGTCGCCGCG TTCTACGCGA TGTTTTTTAA GACGCCGCTG ACAAAGCCGC AGGTTGAAGA CATACTGAGT GGCCGTCACT GA
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Protein sequence | MIQRKIVERR PVALFACVAA LITWTTYALA DRTITDMAGR SVVIADRVTR VATIGPVPVL NSFVFALGEA KSLVNGLPPN LSGPRWRMQY LVDPDIAQLP VLQSGGGAPL VEGLVETKPD IILTMDRQTI DLVARAHTPA VFLAWRQPED VKAVMRLLGQ IYGKAEAAEA YCSYFDATLG NISARLAQQP ARRPRVLYAN LKRMTQPHLI AEWWITKAGG RSVTDGERST EALTFSREQL LAWDPEVMIL SGAVEVAEAY ADPRLSTVSA IRNRRVVAIP AGVHLWGNRT VEEPLTVLWA AQLIHPDLFK DWDIRDEVAA FYAMFFKTPL TKPQVEDILS GRH
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