Gene Nham_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0956 
Symbol 
ID4031775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1056891 
End bp1057922 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID637969459 
Productperiplasmic binding protein 
Protein accessionYP_576269 
Protein GI92116540 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.94277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCAAC GTAAAATAGT CGAACGCAGG CCGGTTGCAC TTTTCGCGTG CGTTGCGGCG 
CTTATAACGT GGACGACATA CGCGCTGGCT GACCGCACGA TCACAGACAT GGCAGGCCGC
AGCGTGGTCA TCGCCGATCG TGTGACGCGT GTGGCGACCA TTGGCCCTGT CCCGGTACTC
AACAGCTTCG TGTTCGCACT TGGCGAGGCA AAATCGCTCG TCAACGGCCT GCCGCCGAAC
CTGTCCGGTC CGCGCTGGCG CATGCAGTAT CTGGTCGATC CCGATATCGC CCAGCTCCCC
GTACTGCAGA GCGGCGGCGG CGCGCCGCTC GTCGAAGGCC TCGTCGAGAC GAAGCCGGAT
ATCATCCTCA CCATGGACCG GCAGACTATC GATCTTGTGG CCCGCGCTCA CACACCCGCG
GTATTCCTGG CATGGCGGCA GCCGGAGGAT GTGAAGGCGG TGATGCGTCT GCTTGGCCAG
ATCTACGGCA AGGCCGAGGC GGCAGAAGCC TATTGCAGCT ACTTCGATGC CACCCTTGGC
AACATCAGCG CGCGGTTGGC GCAGCAGCCG GCGCGGCGGC CACGGGTGCT CTATGCCAAT
CTCAAGCGCA TGACTCAGCC GCACCTTATT GCCGAGTGGT GGATCACCAA GGCCGGCGGT
CGCAGCGTCA CGGATGGCGA ACGTTCCACA GAGGCGCTCA CCTTCTCCCG CGAGCAGCTT
CTGGCATGGG ACCCGGAAGT GATGATTCTC AGTGGCGCGG TCGAGGTTGC CGAGGCCTAC
GCCGATCCAC GCCTCAGCAC CGTCTCGGCC ATCCGCAATC GTCGCGTCGT AGCTATTCCA
GCCGGCGTGC ATCTGTGGGG CAACCGCACC GTCGAGGAGC CGCTGACCGT GCTCTGGGCG
GCGCAGCTTA TCCATCCCGA TCTGTTCAAG GATTGGGACA TCCGCGACGA AGTCGCCGCG
TTCTACGCGA TGTTTTTTAA GACGCCGCTG ACAAAGCCGC AGGTTGAAGA CATACTGAGT
GGCCGTCACT GA
 
Protein sequence
MIQRKIVERR PVALFACVAA LITWTTYALA DRTITDMAGR SVVIADRVTR VATIGPVPVL 
NSFVFALGEA KSLVNGLPPN LSGPRWRMQY LVDPDIAQLP VLQSGGGAPL VEGLVETKPD
IILTMDRQTI DLVARAHTPA VFLAWRQPED VKAVMRLLGQ IYGKAEAAEA YCSYFDATLG
NISARLAQQP ARRPRVLYAN LKRMTQPHLI AEWWITKAGG RSVTDGERST EALTFSREQL
LAWDPEVMIL SGAVEVAEAY ADPRLSTVSA IRNRRVVAIP AGVHLWGNRT VEEPLTVLWA
AQLIHPDLFK DWDIRDEVAA FYAMFFKTPL TKPQVEDILS GRH