Gene Nham_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0942 
Symbol 
ID4031761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1035523 
End bp1036062 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID637969448 
Producthypothetical protein 
Protein accessionYP_576258 
Protein GI92116529 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTC TTCGTTCTCG GCTACGATAC GTTATATATG GTGGAATACC GATCTACGCG 
ATTATGACGG CCGTGCTGTC AGGCGGCCTT GCGTGCGCGC AGACGTCTCG TTCTCCGCAT
CCTCCTTCCC TGGCTGCAAA TAGCCCGCAA GCATCGACGT CGACCTCTAC GTTCGAGGAT
TGGATTGTGC GCTGCGAAGT GAAGCCGCCG GGGTCCAAGG TATGTGAGGC GGTGCAGACG
ATCGCGGCGC GTAACCAGCA GCAACAGCAG AATGTCATCG CGGAAGTCGT ATTCGGCCGG
CTGGCCAAGA CCGAGCCGTT CAAATTAATT ATTCAGCTGC CGCCGGGGGT TTACCTCCCT
TCGGGAGCAC GTCTCGTTCT TGACGACAAG ACGCCGCCGC TTGCCGCAAC GTTCACCCGC
TGCCTTCAGA CCTGCATGGC TGAAGCCGAA CTCAAGCCGG AGACCGTCCA GATATTGAAG
GCAAGGCCAA AGCCGAACCG GGACGTCTGG AATTCGAAGA TGGCGCGCAT CACCAGTTGA
 
Protein sequence
MARLRSRLRY VIYGGIPIYA IMTAVLSGGL ACAQTSRSPH PPSLAANSPQ ASTSTSTFED 
WIVRCEVKPP GSKVCEAVQT IAARNQQQQQ NVIAEVVFGR LAKTEPFKLI IQLPPGVYLP
SGARLVLDDK TPPLAATFTR CLQTCMAEAE LKPETVQILK ARPKPNRDVW NSKMARITS