Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0780 |
Symbol | |
ID | 4031464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 861343 |
End bp | 862272 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637969308 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_576119 |
Protein GI | 92116390 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACGC TTGTTCTCAC GCATCCCGCC AGTCTCGATC ATCTGATGCC GCTCGGTCAC CCGGAGCGGC CGGACCGGAT TCGCGCCATC GATGAGGTGC TGGCCGAAGA TCGCTTCAAG AGTCTGGCAC GCGGCGAGGC GCCGGAAGGC TCGCTGGATT CGGTCGCGCT CTGTCACAAC GAGCATTACA TAGGCGAACT CCGGCACAGG TCTCCGGCGG AGGGTCTGGT TTATCTCGAC AGCGACACCT CGATGTCGCC GGGGACATGG GAGGCGGTGA TGCGCGGCGT CGGCGGCGCT ATCGCGGCGA CCGAGGCCGT CATCGCCGGC AACGCGAGCA ACGCGTTCGT CGCCACGCGC CCGCCGGGAC ATCATGCCGA GACCGGCAGA GCGATGGGCT TCTGCTTTTT CGACCAGGCG GCGATCGCGG CGCGCCACGC CCAGCGCAAG CACGGCATCG GCCGCGTGGC CGTGGTCGAC TTCGATGTAC ATCACGGCAA CGGTACGCAG GATATCTTCT GGGCCGACCG AACGGTGATG TACTGCTCGA CGCATCAGAT GCCGCTGTTC CCCGGCAGCG GCGCCAGCGG CGAACGCGGC GATCACGATA CCATCGTCAA TGCGCCGTTG GCGTCGGGCG ACGGCGGGGC CAAATTTCGT TCCGCGTTCG AGAACCTGAT CCTGCCGCGG CTGGAGACAT TCGCGCCCGA ACTGTTGGTC ATCTCCGCCG GTTTCGACGC GCACAGTCGC GACCCGCTGG CGAGTCTCAA CCTGGATGCG GACGATTTCG GGTGGGTGAC CCGCAAATTG ATGGATATCG CCGACGCGAC CGCAGGCGGC CGAATTGTCT CGGTGCTCGA GGGCGGCTAT AATCTGCAAG GGTTGCAGGA GTCGGTGGCG GCGCATGTCA CCGCACTCAT GGGCGCGTGA
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Protein sequence | MTTLVLTHPA SLDHLMPLGH PERPDRIRAI DEVLAEDRFK SLARGEAPEG SLDSVALCHN EHYIGELRHR SPAEGLVYLD SDTSMSPGTW EAVMRGVGGA IAATEAVIAG NASNAFVATR PPGHHAETGR AMGFCFFDQA AIAARHAQRK HGIGRVAVVD FDVHHGNGTQ DIFWADRTVM YCSTHQMPLF PGSGASGERG DHDTIVNAPL ASGDGGAKFR SAFENLILPR LETFAPELLV ISAGFDAHSR DPLASLNLDA DDFGWVTRKL MDIADATAGG RIVSVLEGGY NLQGLQESVA AHVTALMGA
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