Gene Nham_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0777 
Symbol 
ID4031461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp857538 
End bp858293 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content69% 
IMG OID637969305 
Producthemolysin A 
Protein accessionYP_576116 
Protein GI92116387 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.850156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGC GCAACAGCAC CGAACCCCTC GCCCGCAAGC GCGCCGACGT GCTGCTGGTC 
GAGCGCGGCC TGTTCGAGAG CCGGGCGCGG GCGCAGGCTG CGATCGAGGC CGGGCTCGTC
ACCGCCAACG GCAAGGTTGT GACGAAAGTC TCCGAAACGA TTCCCGTCGA TGCCACGCTC
ACAGCTCAAC CCGCGCATCC CTACGTGTCG CGCGGCGGCG TCAAGCTTGC CGGCGCGCTG
GAGCGCTATC CGATCGAGAT CGAAAACCAC GTCTGCCTCG ATGTCGGCGC CTCGACCGGC
GGCTTCACCG AGGTGCTGCT CGCGGGCGGC GCGGGCCTGG TCTTCGCGGT CGATGTCGGC
CGCGATCAAC TGCATCCGAG CCTGCGTGGC CACCCCCGCG TGGTGTCAAT GGAGTCCACC
GACATCCGCT CGTTCGAAGG CAAGCGGCTG CCGCAGCGGC CGGACGTGGT GGTGATGGAT
GCGAGCTTCA TTTCGCTGAA GGCCATTCTC CCGGTCGCGC TGGCGCTGGC GGCGGCGCCG
ATGCATCTGC TGGCGCTTAT CAAGCCGCAA TTCGAGGCGC CGCGCGCCGC GATCAAGAAG
GGCATCGTCC GCGACGCGGC GGTGCATCGG GCGGTGTGCG ACGACATCGC GGCCTTCGCG
GCGACGCTCG GATGCACCGA GATCGACGTC TTCCCCTCCC CGATCACCGG CGGCGACGGC
AACATCGAAT TCTTCCTCGG GGCCCGCCGT GGCTGA
 
Protein sequence
MAKRNSTEPL ARKRADVLLV ERGLFESRAR AQAAIEAGLV TANGKVVTKV SETIPVDATL 
TAQPAHPYVS RGGVKLAGAL ERYPIEIENH VCLDVGASTG GFTEVLLAGG AGLVFAVDVG
RDQLHPSLRG HPRVVSMEST DIRSFEGKRL PQRPDVVVMD ASFISLKAIL PVALALAAAP
MHLLALIKPQ FEAPRAAIKK GIVRDAAVHR AVCDDIAAFA ATLGCTEIDV FPSPITGGDG
NIEFFLGARR G