Gene Nham_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0557 
Symbol 
ID4031305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp616762 
End bp617394 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID637969087 
Productputative phage repressor 
Protein accessionYP_575907 
Protein GI92116178 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGC TGACACACGC CCAGATATGG ACGGCGCTGG ATCGTCTCGC GGAGCGTTCC 
GGCCTGTCGC CGTCGGGCCT TGCGAGAAAG GCCGGGCTCG ACCCGACCAC CTTCAACAAA 
TCGAAACGCA TCACCGGCGA CGGCCGCGAG CGGTGGCCCT CAACCGAGTC GGTCGCGAAA 
GCGCTCGCCG CCACCGATAC CGCGATCGAC ACCTTCGTGC AGTTCATCGA GGATACGGCG 
CGCGCGACGC AGGCGGTGCC GCTGCTCGGT TTCGCCGAGG CCGGCGCCGG CGGCTATTTC 
GACGATGGCG GCTTCCCTGT CGGCAAGGGC TGGGACGAGG TGGGTCTTCC CTCCGTCCAT 
GACGAGCACG CCTATGCGCT GGAGATATCC GGCGACTCGA TGAAGCCCGC CTATCGCGAC 
GGCGACGTTA TCGTGGTCTC GCCGGGGACG TCGATTCGGC GCGGCGACCG TGTGGTGGTG 
AAGACCAGGG ACGGCGAGGT GATGGTGAAG GAACTCAAGC GCCGAACCGC GAAGATGATT 
GAACTGCAAT CGCTCAATCC GAATCACGTC AACCGCACGC TGGCCGCCTC CGACGTGGAA 
TGGATCGCGC GGATCGTGTG GGCGAGCCAA TGA
 
Protein sequence
MAMLTHAQIW TALDRLAERS GLSPSGLARK AGLDPTTFNK SKRITGDGRE RWPSTESVAK 
ALAATDTAID TFVQFIEDTA RATQAVPLLG FAEAGAGGYF DDGGFPVGKG WDEVGLPSVH 
DEHAYALEIS GDSMKPAYRD GDVIVVSPGT SIRRGDRVVV KTRDGEVMVK ELKRRTAKMI 
ELQSLNPNHV NRTLAASDVE WIARIVWASQ