Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0545 |
Symbol | |
ID | 4030837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 603310 |
End bp | 604278 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637969075 |
Product | malate dehydrogenase |
Protein accession | YP_575895 |
Protein GI | 92116166 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.557349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCG ACAAGATTGC CTTGATCGGC TCCGGTCAGA TCGGAGGAAC GCTCGCTCAT CTCATCGGAC TGAAAGAACT CGGCGATGTC GTGATGTTCG ATATCGCGGA AGGCATTCCG CAGGGCAAAT CTCTCGATAT CGCACAGTCG TCCCCGGTGG ACGGGTTCGA CGCCAAACTG ACCGGCGCCA ATTCCTATGA AGCACTCGAG GGCGCCAGGG TCTGCATCGT GACCGCCGGC ATCCCGCGCA AACCAGGCAT GAGCCGCGAC GATCTCTTGA GCATCAATCT CAAGGTGATG GAGCAGGTCG GCGCCGGCAT CAAGAAATAT GCGCCCGACG CCTTCGTCAT CTGCATCACC AATCCGCTCG ACGCCATGGT GTGGGCGCTT CAGAAAGCCT CGGGTATGCC GGCGAAGAAG GTGGTCGGCA TGGCGGGCGT GCTGGACTCC TCGCGCTTCC GCTATTTCCT CGCCGACGAA TTCGACGTGT CGGTGGAAGA CGTCACGGCC TTCGTGCTCG GCGGCCATGG CGACAGCATG GTGCCGCTGG TGAAGTACTC GACCGTGGCC GGCATTCCAC TGCCGGATCT CGTCAAGATG GGCTGGACCT CGCAGGCGCG CATCGACGAG ATCGTCGATC GCACCCGCAA CGGCGGCGCC GAGATCGTCA ACCTGCTGAA AACCGGTTCG GCGTTCTATG CGCCCGCCGC CTCCGCGATC GCGATGGCGG AAAGTTACCT GCGCGACAAG AAGCGCGTGC TGCCATGCGC CGCCTATCTC AACGGCGAGT TCGGCGTGAA GGACATGTAT GTCGGCGTGC CCGTGGTGAT CGGCGCCAGG GGCGTCGAGC GCATTGTCGA GATCGAACTG GCGGGCAAGG ATCGCGAGGC CTTCGACAAA TCGGTAGGCG CGGTTCAGGG GCTCATCGAT GCCTGCAAGA AGATCGCACC CGATCTGCTG GGGAAGTGA
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Protein sequence | MARDKIALIG SGQIGGTLAH LIGLKELGDV VMFDIAEGIP QGKSLDIAQS SPVDGFDAKL TGANSYEALE GARVCIVTAG IPRKPGMSRD DLLSINLKVM EQVGAGIKKY APDAFVICIT NPLDAMVWAL QKASGMPAKK VVGMAGVLDS SRFRYFLADE FDVSVEDVTA FVLGGHGDSM VPLVKYSTVA GIPLPDLVKM GWTSQARIDE IVDRTRNGGA EIVNLLKTGS AFYAPAASAI AMAESYLRDK KRVLPCAAYL NGEFGVKDMY VGVPVVIGAR GVERIVEIEL AGKDREAFDK SVGAVQGLID ACKKIAPDLL GK
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